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contig_metadata

17 rows where bioproject = "PRJEB58983", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 17 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 17 ✖

bioproject 1

  • PRJEB58983 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6503062 6503062 PRJEB58983_P_NODE_20926_length_285_cov_1.150943_g20511_i0 PRJEB58983 20926 285 1.150943 3.28018755 Globomyces pollinis-pini 382532 Fungi Fungi 103 1.86e-23   NR KAI8893489.1 382532 g20511 i0 57 0.978947368421053 93 39 96.8 1 5 280 352 444 KAI8893489.1 P-loop containing nucleoside triphosphate hydrolase protein [Globomyces pollinis-pini] diamond 279 103 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Globomycetaceae Globomyces Globomyces pollinis-pini
7777446 7777446 PRJEB58983_P_NODE_27767_length_253_cov_1.850000_g27352_i0 PRJEB58983 27767 253 1.85 4.6805 Polychytrium aggregatum 110093 Fungi Fungi 165 2.83e-36   NTclustered gi|2432164628|ref|XM_053113621.1| 110093 g27352 i0 80.531 57.6798418972332 226 34 86 8 25 242 1115 1338 Polychytrium aggregatum Adenosylhomocysteinase (BJ171DRAFT_570225), mRNA blastn 14593 165 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
12878750 12878750 PRJEB58983_P_NODE_34831_length_224_cov_4.006623_g34416_i0 PRJEB58983 34831 224 4.006623 8.97483552 Gromochytrium mamkaevae 1486924 Fungi Fungi 78.7 3.28e-10   NTclustered gi|612507318|gb|KF586842.1| 1486924 g34416 i0 97.778 6.14732142857143 45 1 20 0 177 221 6131 6175 Gromochytrium mamkaevae strain CALU x-51 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1377 78.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Gromochytriales Gromochytriaceae Gromochytrium Gromochytrium mamkaevae
12878779 12878779 PRJEB58983_P_NODE_4111_length_602_cov_25.750473_g3703_i0 PRJEB58983 4111 602 25.750473 155.01784746 Geranomyces variabilis 109894 Fungi Fungi 257 1.18e-63   NTclustered gi|1866582431|gb|MT730606.1| 109894 g3703 i0 95.625 26.2259136212625 160 7 27 0 342 501 4464 4623 Geranomyces variabilis isolate AF30 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15788 257 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Geranomyces Geranomyces variabilis
15427009 15427009 PRJEB58983_P_NODE_10133_length_392_cov_8.213166_g9718_i0 PRJEB58983 10133 392 8.213166 32.19561072 Gromochytrium mamkaevae 1486924 Fungi Fungi 135 3.62e-27   NTclustered gi|612507318|gb|KF586842.1| 1486924 g9718 i0 84.028 34.0280612244898 144 20 36 3 250 392 5975 5834 Gromochytrium mamkaevae strain CALU x-51 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 13339 135 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Gromochytriales Gromochytriaceae Gromochytrium Gromochytrium mamkaevae
16294749 16294749 PRJEB58983_P_NODE_18613_length_299_cov_1.393805_g18198_i0 PRJEB58983 18613 299 1.393805 4.16747695 Fungi 4751 Fungi Fungi 171 1.28e-49   NR KAI8590501.1 109894 g18198 i0 77.6 12.7926421404682 98 21 97.3 1 4 294 218 315 KAI8590501.1 ribosomal protein L3-domain-containing protein [Geranomyces variabilis] diamond 3825 171 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Geranomyces Geranomyces variabilis
20118712 20118712 PRJEB58983_P_NODE_6356_length_488_cov_3.862651_g5942_i0 PRJEB58983 6356 488 3.862651 18.84973688 Nowakowskiella 109880 Fungi Fungi 145 7.63e-30   NTclustered gi|194241380|gb|EU828507.1| 546781 g5942 i0 96.591 16.8893442622951 88 2 18 1 401 488 308 222 Nowakowskiella sp. JH FR 28S large subunit ribosomal RNA gene, partial sequence blastn 8242 145 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Nowakowskiellaceae Nowakowskiella Nowakowskiella sp. JH FR
27374838 27374838 PRJEB58983_P_NODE_27923_length_253_cov_0.866667_g27508_i0 PRJEB58983 27923 253 0.866667 2.19266751 Chytridiomycetes 451435 Fungi Fungi 134 1.3399999999999996e-34   NR KAI8917325.1 281842 g27508 i0 63.1 3.88932806324111 84 31 99.6 0 252 1 431 514 KAI8917325.1 hypothetical protein BC831DRAFT_516559 [Entophlyctis helioformis] diamond 984 135 0.992592592592593 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Entophlyctis Entophlyctis helioformis
27658869 27658869 PRJEB58983_P_NODE_14484_length_334_cov_4.015326_g14069_i0 PRJEB58983 14484 334 4.015326 13.41118884 Fungi 4751 Fungi Fungi 119 4.009999999999999e-32   NR KAI9008584.1 82268 g14069 i0 59.6 25.8682634730539 94 38 84.4 0 317 36 13 106 KAI9008584.1 50S ribosomal protein L30e-like protein [Hyaloraphidium curvatum] diamond 8640 119 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
28801882 28801882 PRJEB58983_P_NODE_14368_length_336_cov_1.186312_g13953_i0 PRJEB58983 14368 336 1.186312 3.98600832 Borealophlyctis nickersoniae 2735257 Fungi Fungi 157 3.74e-46   NR KAJ3282232.1 2735257 g13953 i0 67.3 0.982142857142857 110 35 98.2 1 1 330 54 162 KAJ3282232.1 hypothetical protein HK104_010995 [Borealophlyctis nickersoniae] diamond 330 157 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Borealophlyctidaceae Borealophlyctis Borealophlyctis nickersoniae
29054852 29054852 PRJEB58983_P_NODE_12248_length_360_cov_1.623693_g11833_i0 PRJEB58983 12248 360 1.623693 5.8452948 Synchytrium endobioticum 286115 Fungi Fungi 98.2 2.1e-22   NR TPX40568.1 286115 g11833 i0 51.8 4.66666666666667 112 51 93.3 3 4 339 129 237 TPX40568.1 hypothetical protein SeMB42_g05942 [Synchytrium endobioticum] diamond 1680 98.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium endobioticum
29647438 29647438 PRJEB58983_P_NODE_35130_length_213_cov_4.864286_g34715_i0 PRJEB58983 35130 213 4.864286 10.36092918 Fungi 4751 Fungi Fungi 79 2.5e-16   NR XP_016609134.1 645134 g34715 i0 50.7 5.97183098591549 71 35 100 0 1 213 5 75 XP_016609134.1 60S ribosomal protein L20 [Spizellomyces punctatus DAOM BR117] diamond 1272 79 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
29970424 29970424 PRJEB58983_P_NODE_7511_length_451_cov_2.425926_g7097_i0 PRJEB58983 7511 451 2.425926 10.94092626 Chytridium lagenaria 64509 Fungi Fungi 135 1.38e-37   NR KAI8853126.1 64509 g7097 i0 47.8 1.68292682926829 136 70 90.5 1 22 429 5 139 KAI8853126.1 40S ribosomal protein S19-A [Chytridium lagenaria] diamond 759 135 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Chytridium Chytridium lagenaria
30918436 30918436 PRJEB58983_P_NODE_21054_length_284_cov_1.928910_g20639_i0 PRJEB58983 21054 284 1.92891 5.4781044 Hyaloraphidium curvatum 82268 Fungi Fungi 84.7 3.91e-17   NR KAI9034634.1 82268 g20639 i0 48.2 2.67253521126761 85 43 88.7 1 12 263 18 102 KAI9034634.1 ubiquitin-related domain-containing protein, partial [Hyaloraphidium curvatum] diamond 759 84.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
31297471 31297471 PRJEB58983_P_NODE_20295_length_288_cov_2.418605_g19880_i0 PRJEB58983 20295 288 2.418605 6.9655824 Cladochytrium tenue 1604274 Fungi Fungi 120 7.180000000000001e-33   NR KAJ1568147.1 1604274 g19880 i0 64.2 0.989583333333333 95 34 99 0 286 2 4 98 KAJ1568147.1 60S ribosomal protein L32 [Cladochytrium tenue] diamond 285 120 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium tenue
31866698 31866698 PRJEB58983_P_NODE_29277_length_249_cov_1.772727_g28862_i0 PRJEB58983 29277 249 1.772727 4.41409023 Hyaloraphidium curvatum 82268 Fungi Fungi 46.2 0.00234   NR KAI9002515.1 82268 g28862 i0 43.1 0.783132530120482 65 36 77.1 1 195 4 62 126 KAI9002515.1 hypothetical protein DFJ74DRAFT_695896 [Hyaloraphidium curvatum] diamond 195 46.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
32563218 32563218 PRJEB58983_P_NODE_31099_length_245_cov_0.906977_g30684_i0 PRJEB58983 31099 245 0.906977 2.22209365 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 145 4.03e-38   NR KAJ1327207.1 1357716 g30684 i0 86.4 17.5836734693878 81 11 99.2 0 243 1 734 814 KAJ1327207.1 pre-mRNA-processing-splicing factor 8 [Batrachochytrium salamandrivorans] diamond 4308 145 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;