RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB58983", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJEB58983 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6503049 6503049 PRJEB58983_P_NODE_20386_length_288_cov_1.218605_g19971_i0 PRJEB58983 20386 288 1.218605 3.5095824 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 499 7.92e-137   NTclustered gi|1950821269|gb|CP066696.1| 2026720 g19971 i0 97.917 75.09375 288 6 100 0 1 288 799739 800026 Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome blastn 21627 499 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
7777513 7777513 PRJEB58983_P_NODE_30847_length_245_cov_2.593023_g30432_i0 PRJEB58983 30847 245 2.593023 6.35290635 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 315 2.55e-81   NTclustered gi|2874253873|emb|OY969928.1| 179883 g30432 i0 91.064 233.865306122449 235 18 95 2 1 232 599194 598960 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD04212.bin.c.13 genome assembly, chromosome: 1 blastn 57297 315 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;