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contig_metadata

11 rows where bioproject = "PRJEB56699" and tax_clade = "Opisthokonta"

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tax_phylum 3

tax_kingdom 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Opisthokonta · 11 ✖

bioproject 1

  • PRJEB56699 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1399032 1399032 PRJEB56699_P_NODE_1922_length_412_cov_4.563969_g1699_i0 PRJEB56699 1922 412 4.563969 18.80355228 uncultured fungus 175245 Fungi Fungi 481 4.26e-131   NTclustered gi|2159200548|emb|OU939164.1| 175245 g1699 i0 96.552 85.6990291262136 290 10 89 0 107 396 423 712 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus00458 blastn 35308 481 1 Eukaryota Opisthokonta Fungi           uncultured fungus
2267275 2267275 PRJEB56699_P_NODE_1662_length_449_cov_5.628571_g1449_i0 PRJEB56699 1662 449 5.628571 25.27228379 Eukaryota 2759 Fungi Fungi 252 3.99e-62   NTclustered gi|511488219|gb|JX898639.1| 175245 g1449 i0 81.677 22.6547884187082 322 42 70 13 134 449 584 274 Uncultured fungus clone BME_D02-15 28S ribosomal RNA gene, partial sequence blastn 10172 254 0.992125984251969 Eukaryota Opisthokonta Fungi           uncultured fungus
5227152 5227152 PRJEB56699_P_NODE_6325_length_164_cov_2.281481_g6095_i0 PRJEB56699 6325 164 2.281481 3.74162884 Nuclearia simplex 154970 Root_unresolved Root_unresolved 265 1.6199999999999998e-66   NTclustered gi|37359199|gb|AY148095.1| 154970 g6095 i0 95.758 55.7560975609756 165 6 100 1 1 164 330 166 Nuclearia simplex 28S large subunit ribosomal RNA gene, complete sequence blastn 9144 265 1 Eukaryota Opisthokonta       Rotosphaerida Nucleariidae Nuclearia Nuclearia simplex
6095165 6095165 PRJEB56699_P_NODE_5005_length_210_cov_1.834254_g4775_i0 PRJEB56699 5005 210 1.834254 3.8519334 Lumbricidae 6392 Annelida Annelida 165 2.27e-36   NTclustered gi|383088841|gb|JQ739968.1| 6396 g4775 i0 100 77.6380952380952 89 0 80 0 122 210 552 464 Eisenia fetida isolate H28 28S ribosomal RNA gene, partial sequence blastn 16304 165 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Lumbricidae Eisenia Eisenia fetida
9051830 9051830 PRJEB56699_P_NODE_3828_length_257_cov_4.442982_g3598_i0 PRJEB56699 3828 257 4.442982 11.41846374 uncultured fungus 175245 Fungi Fungi 285 2.12e-72   NTclustered gi|511488219|gb|JX898639.1| 175245 g3598 i0 87.55 37.2490272373541 249 27 96 3 11 257 520 274 Uncultured fungus clone BME_D02-15 28S ribosomal RNA gene, partial sequence blastn 9573 285 1 Eukaryota Opisthokonta Fungi           uncultured fungus
9051831 9051831 PRJEB56699_P_NODE_5248_length_203_cov_2.103448_g5018_i0 PRJEB56699 5248 203 2.103448 4.26999944 Polypterus senegalus 55291 Chordata Chordata 180 7.78e-41   NTclustered gi|1993937637|ref|XM_039741126.1| 55291 g5018 i0 89.583 8.0935960591133 144 12 70 3 62 203 1173 1315 PREDICTED: Polypterus senegalus E3 SUMO-protein ligase ZBED1-like (LOC120518358), transcript variant X2, mRNA blastn 1643 180 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
14153013 14153013 PRJEB56699_P_NODE_4252_length_236_cov_2.449275_g4022_i0 PRJEB56699 4252 236 2.449275 5.780289 uncultured fungus 175245 Fungi Fungi 335 1.8799999999999996e-87   NTclustered gi|2159201956|emb|OU939969.1| 175245 g4022 i0 92.373 30.6652542372881 236 17 100 1 1 236 518 752 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus01262 blastn 7237 335 1 Eukaryota Opisthokonta Fungi           uncultured fungus
18843649 18843649 PRJEB56699_P_NODE_6555_length_155_cov_4.301587_g6325_i0 PRJEB56699 6555 155 4.301587 6.66745985 Siepmannia 595254 Fungi Fungi 76.8 7.56e-10   NTclustered gi|570963359|gb|KF617961.1| 175245 g6325 i0 81.443 1.09032258064516 97 15 62 3 4 99 203 297 Uncultured fungus clone 3182H8 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 169 76.8 1 Eukaryota Opisthokonta Fungi           uncultured fungus
23076628 23076628 PRJEB56699_P_NODE_4119_length_241_cov_4.235849_g3889_i0 PRJEB56699 4119 241 4.235849 10.20839609 uncultured fungus 175245 Fungi Fungi 270 5.499999999999999e-68   NTclustered gi|2159200548|emb|OU939164.1| 175245 g3889 i0 86.831 82.5767634854772 243 30 100 2 1 241 896 654 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus00458 blastn 19901 270 1 Eukaryota Opisthokonta Fungi           uncultured fungus
26931915 26931915 PRJEB56699_P_NODE_2902_length_318_cov_13.660900_g2672_i0 PRJEB56699 2902 318 13.6609 43.441662 Saccharomycetaceae 4893 Fungi Fungi 63.2 7.63e-10   NR KAF4001137.1 4932 g2672 i0 54.5 3.09433962264151 66 20 62.3 1 4 201 51 106 KAF4001137.1 Protein TAR1 domain protein [Saccharomyces cerevisiae] diamond 984 63.5 0.995275590551181 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
27001715 27001715 PRJEB56699_P_NODE_5622_length_193_cov_2.189024_g5392_i0 PRJEB56699 5622 193 2.189024 4.22481632 Bufotes viridis 30338 Chordata Chordata 49.3 9.26e-5   NR CAK8629749.1 30338 g5392 i0 71.4 0.435233160621762 28 8 43.5 0 138 55 337 364 CAK8629749.1 Interleukin-1 receptor type 1 [Bufotes viridis] diamond 84 49.3 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bufonidae Bufotes Bufotes viridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;