contig_metadata
15 rows where bioproject = "PRJEB56699" and tax_clade = "FCB group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124578 | 124578 | PRJEB56699_P_NODE_5201_length_204_cov_3.920000_g4971_i0 | PRJEB56699 | 5201 | 204 | 3.92 | 7.9968 | Aquirufa lenticrescens | 2696560 | Bacteria | Bacteria | 366 | 5.599999999999998e-97 | NTclustered | gi|2091518249|gb|CP049834.1| | 2696560 | g4971 | i0 | 99.02 | 269.475490196078 | 204 | 2 | 100 | 0 | 1 | 204 | 217272 | 217475 | Aquirufa lenticrescens strain 9H-EGSE chromosome, complete genome | blastn | 54973 | 366 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Aquirufa | Aquirufa lenticrescens | |
| 992050 | 992050 | PRJEB56699_P_NODE_4221_length_237_cov_23.740385_g3991_i0 | PRJEB56699 | 4221 | 237 | 23.740385 | 56.26471245 | Bacteroidota | 976 | Bacteria | Bacteria | 244 | 3.27e-60 | NTclustered | gi|2659462819|gb|CP136426.1| | 1735111 | g3991 | i0 | 86.486 | 250.489451476793 | 222 | 30 | 99 | 0 | 16 | 237 | 1196001 | 1195780 | Bergeyella porcorum strain QD2021 chromosome, complete genome | blastn | 59366 | 244 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Bergeyella | Bergeyella porcorum | |
| 1399034 | 1399034 | PRJEB56699_P_NODE_3022_length_308_cov_4.641577_g2792_i0 | PRJEB56699 | 3022 | 308 | 4.641577 | 14.29605716 | Cloacibacterium caeni | 2004710 | Bacteria | Bacteria | 514 | 3.05e-141 | NTclustered | gi|2040340748|emb|OU015321.1| | 2004710 | g2792 | i0 | 98.955 | 292.886363636364 | 287 | 3 | 93 | 0 | 1 | 287 | 1875654 | 1875940 | Cloacibacterium caeni isolate Isolate2 genome assembly, chromosome: 1 | blastn | 90209 | 514 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Cloacibacterium | Cloacibacterium caeni | |
| 2674665 | 2674665 | PRJEB56699_P_NODE_4383_length_230_cov_4.691542_g4153_i0 | PRJEB56699 | 4383 | 230 | 4.691542 | 10.7905466 | Flavobacterium cerinum | 2502784 | Bacteria | Bacteria | 420 | 4.89e-113 | NTclustered | gi|2279330881|gb|CP101751.1| | 2502784 | g4153 | i0 | 99.565 | 690.208695652174 | 230 | 1 | 100 | 0 | 1 | 230 | 719250 | 719021 | Flavobacterium cerinum strain C1 chromosome, complete genome | blastn | 158748 | 420 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium cerinum | |
| 4819981 | 4819981 | PRJEB56699_P_NODE_424_length_885_cov_7.214953_g321_i0 | PRJEB56699 | 424 | 885 | 7.214953 | 63.85233405 | Aquirufa | 2676247 | Bacteria | Bacteria | 983 | 0 | NTclustered | gi|1390254249|gb|CP029346.1| | 2516557 | g321 | i0 | 86.898 | 263.892655367232 | 893 | 97 | 100 | 17 | 1 | 885 | 360463 | 359583 | Aquirufa nivalisilvae strain HME7025 chromosome, complete genome | blastn | 233545 | 989 | 0.993933265925177 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Aquirufa | Aquirufa nivalisilvae | |
| 4819987 | 4819987 | PRJEB56699_P_NODE_6484_length_158_cov_2.759690_g6254_i0 | PRJEB56699 | 6484 | 158 | 2.75969 | 4.3603102 | Flavobacterium | 237 | Bacteria | Bacteria | 254 | 3.3400000000000003e-63 | NTclustered | gi|2477680642|gb|CP114882.2| | 3016339 | g6254 | i0 | 96.129 | 524.658227848101 | 155 | 6 | 98 | 0 | 1 | 155 | 122711 | 122865 | Flavobacterium lacustre strain IMCC36792 chromosome, complete genome | blastn | 82896 | 254 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium lacustre | |
| 6095167 | 6095167 | PRJEB56699_P_NODE_545_length_787_cov_14.195251_g57_i1 | PRJEB56699 | 545 | 787 | 14.195251 | 111.71662537 | Fluviicola | 332102 | Bacteria | Bacteria | 1051 | 0 | NTclustered | gi|470488043|ref|NR_076848.1| | 191579 | g57 | i1 | 90.909 | 346.304955527319 | 792 | 59 | 100 | 11 | 1 | 787 | 1854 | 1071 | Fluviicola taffensis strain RW262 23S ribosomal RNA gene, complete sequence | blastn | 272542 | 1051 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Crocinitomicaceae | Fluviicola | Fluviicola taffensis | |
| 11603023 | 11603023 | PRJEB56699_P_NODE_4750_length_217_cov_3.031915_g4520_i0 | PRJEB56699 | 4750 | 217 | 3.031915 | 6.57925555 | Mucilaginibacter mali | 2740462 | Bacteria | Bacteria | 183 | 6.51e-42 | NTclustered | gi|1850321202|gb|CP054139.1| | 2740462 | g4520 | i0 | 94.215 | 131.433179723502 | 121 | 5 | 56 | 1 | 97 | 217 | 1169546 | 1169664 | Mucilaginibacter mali strain G2-14 chromosome, complete genome | blastn | 28521 | 183 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Mucilaginibacter | Mucilaginibacter mali | |
| 12878206 | 12878206 | PRJEB56699_P_NODE_2691_length_334_cov_10.724590_g2461_i0 | PRJEB56699 | 2691 | 334 | 10.72459 | 35.8201306 | Flavobacterium cerinum | 2502784 | Bacteria | Bacteria | 481 | 3.39e-131 | NTclustered | gi|2279330881|gb|CP101751.1| | 2502784 | g2461 | i0 | 96.246 | 393.01497005988 | 293 | 11 | 88 | 0 | 41 | 333 | 721507 | 721215 | Flavobacterium cerinum strain C1 chromosome, complete genome | blastn | 131267 | 481 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium cerinum | |
| 13745464 | 13745464 | PRJEB56699_P_NODE_1551_length_465_cov_14.853211_g1343_i0 | PRJEB56699 | 1551 | 465 | 14.853211 | 69.06743115 | Cloacibacterium | 501783 | Bacteria | Bacteria | 671 | 0 | NTclustered | gi|1527207946|gb|CP034157.1| | 237258 | g1343 | i0 | 98.677 | 397.150537634409 | 378 | 5 | 81 | 0 | 86 | 463 | 129273 | 129650 | Cloacibacterium normanense strain NRS-1 chromosome, complete genome | blastn | 184675 | 671 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Cloacibacterium | Cloacibacterium normanense | |
| 15019866 | 15019866 | PRJEB56699_P_NODE_92_length_1679_cov_18.912727_g57_i0 | PRJEB56699 | 92 | 1679 | 18.912727 | 317.54468633 | Fluviicola | 332102 | Bacteria | Bacteria | 1742 | 0 | NTclustered | gi|470488043|ref|NR_076848.1| | 191579 | g57 | i0 | 85.647 | 455.921381774866 | 1700 | 195 | 99 | 42 | 6 | 1679 | 21 | 1697 | Fluviicola taffensis strain RW262 23S ribosomal RNA gene, complete sequence | blastn | 765492 | 1742 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Crocinitomicaceae | Fluviicola | Fluviicola taffensis | |
| 15019867 | 15019867 | PRJEB56699_P_NODE_972_length_591_cov_11.996441_g802_i0 | PRJEB56699 | 972 | 591 | 11.996441 | 70.89896631 | Fluviicola | 332102 | Bacteria | Bacteria | 725 | 0 | NTclustered | gi|470488043|ref|NR_076848.1| | 191579 | g802 | i0 | 88.945 | 519.576988155668 | 597 | 52 | 100 | 14 | 1 | 591 | 19 | 607 | Fluviicola taffensis strain RW262 23S ribosomal RNA gene, complete sequence | blastn | 307070 | 725 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Crocinitomicaceae | Fluviicola | Fluviicola taffensis | |
| 21394102 | 21394102 | PRJEB56699_P_NODE_597_length_749_cov_12.381944_g57_i2 | PRJEB56699 | 597 | 749 | 12.381944 | 92.74076056 | Fluviicola | 332102 | Bacteria | Bacteria | 1029 | 0 | NTclustered | gi|470488043|ref|NR_076848.1| | 191579 | g57 | i2 | 92.435 | 432.631508678238 | 727 | 46 | 97 | 8 | 1 | 724 | 1071 | 1791 | Fluviicola taffensis strain RW262 23S ribosomal RNA gene, complete sequence | blastn | 324041 | 1029 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Crocinitomicaceae | Fluviicola | Fluviicola taffensis | |
| 24350450 | 24350450 | PRJEB56699_P_NODE_4080_length_243_cov_8.588785_g3850_i0 | PRJEB56699 | 4080 | 243 | 8.588785 | 20.87074755 | Flavobacterium sp. N2270 | 2986831 | Bacteria | Bacteria | 324 | 4.2e-84 | NTclustered | gi|2324023718|gb|CP110005.1| | 2986831 | g3850 | i0 | 91.213 | 545.41975308642 | 239 | 20 | 98 | 1 | 2 | 240 | 292079 | 291842 | Flavobacterium sp. N2270 chromosome, complete genome | blastn | 132537 | 324 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. N2270 | |
| 28423386 | 28423386 | PRJEB56699_P_NODE_4866_length_214_cov_1.540541_g4636_i0 | PRJEB56699 | 4866 | 214 | 1.540541 | 3.29675774 | Niabella hibiscisoli | 1825928 | Bacteria | Bacteria | 42.4 | 0.0268 | NR | WP_240847907.1 | 1825928 | g4636 | i0 | 48.6 | 0.490654205607477 | 35 | 18 | 49.1 | 0 | 78 | 182 | 36 | 70 | WP_240847907.1 J domain-containing protein [Niabella hibiscisoli] | diamond | 105 | 42.4 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Niabella | Niabella hibiscisoli |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;