RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB56699", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Campbelliibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Campbelliibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJEB56699 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15427002 15427002 PRJEB56699_P_NODE_2373_length_361_cov_2.686747_g2145_i0 PRJEB56699 2373 361 2.686747 9.69915667 Candidatus Campbellbacteria bacterium 2026716 Bacteria Bacteria 235 3.17e-57   NTclustered gi|1958034697|gb|CP064977.1| 2026716 g2145 i0 78.962 47.7950138504155 366 62 99 15 4 360 448619 448260 MAG: Candidatus Campbellbacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.283_fly_man chromosome, complete genome blastn 17254 235 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;