contig_metadata
7 rows where bioproject = "PRJEB56027", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1396382 | 1396382 | PRJEB56027_P_NODE_101102_length_267_cov_1.587629_g98293_i0 | PRJEB56027 | 101102 | 267 | 1.587629 | 4.23896943 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 161 | 1.15e-43 | NR | MFT3922441.1 | 2026763 | g98293 | i0 | 90.9 | 0.98876404494382 | 88 | 8 | 98.9 | 0 | 266 | 3 | 873 | 960 | MFT3922441.1 CusA/CzcA family heavy metal efflux RND transporter [Myxococcales bacterium] | diamond | 264 | 161 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 7775372 | 7775372 | PRJEB56027_P_NODE_138567_length_207_cov_4.343284_g135758_i0 | PRJEB56027 | 138567 | 207 | 4.343284 | 8.99059788 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 52.8 | 0.018 | NTclustered | gi|2108340089|gb|CP070660.1| | 2026735 | g135758 | i0 | 100 | 0.135265700483092 | 28 | 0 | 14 | 0 | 17 | 44 | 169888 | 169915 | MAG: Deltaproteobacteria bacterium isolate bin79 chromosome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 17973948 | 17973948 | PRJEB56027_P_NODE_115015_length_251_cov_0.865169_g112206_i0 | PRJEB56027 | 115015 | 251 | 0.865169 | 2.17157419 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 122 | 3.22e-30 | NR | MBC7794110.1 | 2026735 | g112206 | i0 | 79.5 | 0.99203187250996006 | 83 | 17 | 99.2 | 0 | 1 | 249 | 429 | 511 | MBC7794110.1 potassium-transporting ATPase subunit KdpA [Deltaproteobacteria bacterium] | diamond | 249 | 122 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 27570669 | 27570669 | PRJEB56027_P_NODE_132984_length_241_cov_0.916667_g130175_i0 | PRJEB56027 | 132984 | 241 | 0.916667 | 2.20916747 | Archangium sp. Cb G35 | 1920190 | Bacteria | Bacteria | 42.7 | 0.0333 | NR | OJT22995.1 | 1920190 | g130175 | i0 | 38.9 | 1.79253112033195 | 72 | 40 | 89.6 | 1 | 9 | 224 | 17 | 84 | OJT22995.1 hypothetical protein BO221_19065 [Archangium sp. Cb G35] | diamond | 432 | 42.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium sp. Cb G35 | ||
| 27570670 | 27570670 | PRJEB56027_P_NODE_74244_length_317_cov_1.118852_g71435_i0 | PRJEB56027 | 74244 | 317 | 1.118852 | 3.54676084 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 45.4 | 0.00698 | NR | HTO52293.1 | 2818507 | g71435 | i0 | 47.8 | 0.634069400630915 | 67 | 32 | 62.5 | 3 | 288 | 91 | 107 | 171 | HTO52293.1 GNAT family N-acetyltransferase [Myxococcota bacterium] | diamond | 201 | 45.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 31234064 | 31234064 | PRJEB56027_P_NODE_126815_length_244_cov_1.497076_g124006_i0 | PRJEB56027 | 126815 | 244 | 1.497076 | 3.65286544 | Polyangia bacterium | 3058050 | Bacteria | Bacteria | 53.9 | 4.32e-6 | NR | HEX7505255.1 | 3058050 | g124006 | i0 | 71.9 | 0.39344262295082 | 32 | 9 | 39.3 | 0 | 2 | 97 | 480 | 511 | HEX7505255.1 HEAT repeat domain-containing protein [Polyangia bacterium] | diamond | 96 | 53.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangia bacterium | ||||||
| 31645276 | 31645276 | PRJEB56027_P_NODE_129397_length_243_cov_0.905882_g126588_i0 | PRJEB56027 | 129397 | 243 | 0.905882 | 2.20129326 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 99 | 5.41e-22 | NR | MBI2609428.1 | 2026735 | g126588 | i0 | 62.8 | 15.4074074074074 | 78 | 29 | 96.3 | 0 | 236 | 3 | 284 | 361 | MBI2609428.1 chaperonin GroEL [Deltaproteobacteria bacterium] | diamond | 3744 | 99 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;