RNAquarium Metadata Server
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contig_metadata

13 rows where bioproject = "PRJEB56027" and tax_kingdom = "Bamfordvirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 13 ✖

bioproject 1

  • PRJEB56027 · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12876057 12876057 PRJEB56027_P_NODE_120491_length_248_cov_0.880000_g117682_i0 PRJEB56027 120491 248 0.88 2.1824 Adintovirus homo13306 3115911 Viruses Viruses 364 2.539999999999999e-96   NTclustered gi|2710391106|tpg|BK066467.1| 3115911 g117682 i0 93.173 1.00403225806452 249 16 100 1 1 248 507 755 MAG TPA_asm: Adintovirus homo13306 isolate Adinto13306 genomic sequence blastn 249 364 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus homo13306
21394040 21394040 PRJEB56027_P_NODE_138737_length_202_cov_4.379845_g135928_i0 PRJEB56027 138737 202 4.379845 8.8472869 root 1 Root_unresolved Root_unresolved 267 5.77e-67   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g135928 i0 99.324 73.2673267326733 148 0 73 1 56 202 11403 11550 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 14800 267 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
26748244 26748244 PRJEB56027_P_NODE_87861_length_286_cov_1.136150_g85052_i0 PRJEB56027 87861 286 1.13615 3.249389 Zebrafish jaw poxvirus RQ14 Viruses Viruses 42 0.0382   NR BCT22666.1 RQ14 g85052 i0 31.3 1.00699300699301 96 60 94.4 2 8 277 7 102 BCT22666.1 hypothetical protein [Carp edema virus] diamond 288 42 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
26875664 26875664 PRJEB56027_P_NODE_32441_length_668_cov_1.882353_g29677_i0 PRJEB56027 32441 668 1.882353 12.57411804 Zebrafish jaw poxvirus RQ14 Viruses Viruses 80.1 2.43e-14   NR BCT22707.1 RQ14 g29677 i0 34.3 0.772455089820359 172 96 74.6 7 53 550 18 178 BCT22707.1 hypothetical protein [Carp edema virus] diamond 516 80.1 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
27413083 27413083 PRJEB56027_P_NODE_103103_length_264_cov_2.560209_g100294_i0 PRJEB56027 103103 264 2.560209 6.75895176 Zebrafish jaw poxvirus RQ14 Viruses Viruses 95.9 9.56e-21   NR BCT22616.1 RQ14 g100294 i0 53.5 0.977272727272727 86 40 97.7 0 263 6 567 652 BCT22616.1 poly(A)-polymerase catalytic subunit PAPL [Carp edema virus] diamond 258 95.9 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
28833640 28833640 PRJEB56027_P_NODE_16408_length_1387_cov_5.143075_g14439_i0 PRJEB56027 16408 1387 5.143075 71.33445025 Zebrafish jaw poxvirus RQ14 Viruses Viruses 181 5.62e-49   NR BCT22626.1 RQ14 g14439 i0 36.4 0.677000720980534 313 182 64.7 6 1162 266 3 312 BCT22626.1 putative DNA-binding virion core protein [Carp edema virus] diamond 939 181 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
28896707 28896707 PRJEB56027_P_NODE_38728_length_552_cov_1.586639_g35933_i0 PRJEB56027 38728 552 1.586639 8.75824728 Zebrafish jaw poxvirus RQ14 Viruses Viruses 76.6 9.39e-13   NR BCT22638.1 RQ14 g35933 i0 31.4 0.864130434782609 159 95 84.8 2 552 85 31 178 BCT22638.1 deoxynucleoside monophosphate kinase [Carp edema virus] diamond 477 76.6 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
29149833 29149833 PRJEB56027_P_NODE_44429_length_479_cov_2.197044_g41622_i0 PRJEB56027 44429 479 2.197044 10.52384076 Zebrafish jaw poxvirus RQ14 Viruses Viruses 89.7 3.37e-19   NR BCT22576.1 RQ14 g41622 i0 42.2 0.801670146137787 128 72 78.9 2 426 49 44 171 BCT22576.1 deoxyuridine triphosphatase [Carp edema virus] diamond 384 89.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
29464758 29464758 PRJEB56027_P_NODE_109910_length_256_cov_1.169399_g107101_i0 PRJEB56027 109910 256 1.169399 2.99366144 Zebrafish jaw poxvirus RQ14 Viruses Viruses 142 3.989999999999999e-37   NR BCT22721.1 RQ14 g107101 i0 72.6 0.984375 84 23 98.4 0 254 3 54 137 BCT22721.1 RNA polymerase subunit RPO147 [Carp edema virus] diamond 252 142 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
29938942 29938942 PRJEB56027_P_NODE_61931_length_360_cov_1.470383_g59122_i0 PRJEB56027 61931 360 1.470383 5.2933788 Zebrafish jaw poxvirus RQ14 Viruses Viruses 117 3.74e-29   NR BCT22694.1 RQ14 g59122 i0 54.8 0.958333333333333 115 50 95.8 2 14 358 8 120 BCT22694.1 mRNA capping enzyme small subunit [Carp edema virus] diamond 345 117 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
30223089 30223089 PRJEB56027_P_NODE_33652_length_642_cov_2.302285_g30880_i0 PRJEB56027 33652 642 2.302285 14.7806697 Zebrafish jaw poxvirus RQ14 Viruses Viruses 52.4 4.98e-4   NR BCT22655.1 RQ14 g30880 i0 38.6 0.266355140186916 57 35 26.6 0 530 360 416 472 BCT22655.1 hypothetical protein [Carp edema virus] diamond 171 52.4 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
32404831 32404831 PRJEB56027_P_NODE_129359_length_243_cov_0.905882_g126550_i0 PRJEB56027 129359 243 0.905882 2.20129326 Zebrafish jaw poxvirus RQ14 Viruses Viruses 78.2 5.45e-15   NR BCT22575.1 RQ14 g126550 i0 50 1.03703703703704 84 39 100 1 1 243 141 224 BCT22575.1 thymidine kinase [Carp edema virus] diamond 252 78.2 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
32468292 32468292 PRJEB56027_P_NODE_79699_length_302_cov_2.323144_g76890_i0 PRJEB56027 79699 302 2.323144 7.01589488 Zebrafish jaw poxvirus RQ14 Viruses Viruses 49.3 7e-5   NR BCT22666.1 RQ14 g76890 i0 43.3 0.665562913907285 67 37 65.6 1 8 205 36 102 BCT22666.1 hypothetical protein [Carp edema virus] diamond 201 49.3 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;