RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJEB56027" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 7 ✖

bioproject 1

  • PRJEB56027 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1398788 1398788 PRJEB56027_P_NODE_90862_length_281_cov_1.980769_g88053_i0 PRJEB56027 90862 281 1.980769 5.56596089 Candidatus Saccharibacteria bacterium RAAC3_TM7_1 1394711 Bacteria Bacteria 326 1.38e-84   NTclustered gi|563353835|gb|CP006915.1| 1394711 g88053 i0 87.633 35.2384341637011 283 31 100 4 1 281 450330 450610 Candidatus Saccharibacteria bacterium RAAC3_TM7_1, complete genome blastn 9902 326 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RAAC3_TM7_1
26843883 26843883 PRJEB56027_P_NODE_128401_length_243_cov_1.905882_g125592_i0 PRJEB56027 128401 243 1.905882 4.63129326 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 42 0.0368   NR HJQ82598.1 2838779 g125592 i0 45 0.493827160493827 40 22 49.4 0 77 196 7 46 HJQ82598.1 nitroreductase family deazaflavin-dependent oxidoreductase [Candidatus Binatia bacterium] diamond 120 42 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27413084 27413084 PRJEB56027_P_NODE_104823_length_262_cov_1.629630_g102014_i0 PRJEB56027 104823 262 1.62963 4.2696306 candidate division SR1 bacterium 2044938 Bacteria Bacteria 53.9 5.41e-6   NR MBB1557011.1 2044938 g102014 i0 100 0.297709923664122 26 0 29.8 0 228 151 524 549 MBB1557011.1 glutamate--tRNA ligase [candidate division SR1 bacterium] diamond 78 53.9 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
29079593 29079593 PRJEB56027_P_NODE_138088_length_226_cov_2.013072_g135279_i0 PRJEB56027 138088 226 2.013072 4.54954272 Candidatus Saccharimonas 1331051 Bacteria Bacteria 140 6.14e-41   NR RKW04111.1 1917697 g135279 i0 100 1.9646017699115 74 0 98.2 0 3 224 5 78 RKW04111.1 MAG: threonine/serine exporter family protein, partial [Candidatus Saccharimonas sp.] diamond 444 140 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
29370530 29370530 PRJEB56027_P_NODE_116529_length_250_cov_0.870056_g113720_i0 PRJEB56027 116529 250 0.870056 2.17514 Candidatus Buchananbacteria bacterium 2268182 Bacteria Bacteria 73.6 1.31e-13   NR MFA6526504.1 2268182 g113720 i0 59 0.732 61 25 73.2 0 67 249 1 61 MFA6526504.1 TasA family protein [Candidatus Buchananbacteria bacterium] diamond 183 73.6 1 Bacteria Bacteria candidate phyla   Candidatus Buchananiibacteriota         Candidatus Buchananbacteria bacterium
30500769 30500769 PRJEB56027_P_NODE_86333_length_288_cov_1.432558_g83524_i0 PRJEB56027 86333 288 1.432558 4.12576704 Bacteria 2 Bacteria Bacteria 48.1 1.72e-4   NR HSR22743.1 2212470 g83524 i0 44.3 3.95833333333333 61 26 63.5 1 4 186 37 89 HSR22743.1 hypothetical protein [Candidatus Eiseniibacteriota bacterium] diamond 1140 48.5 0.991752577319588 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
31923303 31923303 PRJEB56027_P_NODE_130957_length_242_cov_0.911243_g128148_i0 PRJEB56027 130957 242 0.911243 2.20520806 Candidatus Southlakia 3350975 Bacteria Bacteria 84.3 1.78e-18   NR MCA9340086.1 2026720 g128148 i0 95.3 3.73140495867769 43 2 53.3 0 239 111 113 155 MCA9340086.1 Flp pilus assembly complex ATPase component TadA [Candidatus Saccharibacteria bacterium] diamond 903 85.1 0.990599294947121 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;