contig_metadata
10 rows where bioproject = "PRJEB55250", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7774262 | 7774262 | PRJEB55250_P_NODE_4727_length_322_cov_1.293173_g4603_i0 | PRJEB55250 | 4727 | 322 | 1.293173 | 4.16401706 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 556 | 5.25e-154 | NTclustered | gi|1950812799|gb|CP066681.1| | 349221 | g4603 | i0 | 97.826 | 198.717391304348 | 322 | 7 | 100 | 0 | 1 | 322 | 660312 | 660633 | Micavibrio aeruginosavorus isolate NC_groundwater_70_Ag_B-0.1um_54_66 chromosome | blastn | 63987 | 556 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 17973369 | 17973369 | PRJEB55250_P_NODE_16335_length_241_cov_1.732143_g16211_i0 | PRJEB55250 | 16335 | 241 | 1.732143 | 4.17446463 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 375 | 1.1299999999999998e-99 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g16211 | i0 | 94.979 | 2.98340248962656 | 239 | 12 | 99 | 0 | 1 | 239 | 1109992 | 1110230 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 719 | 375 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 18843466 | 18843466 | PRJEB55250_P_NODE_2335_length_428_cov_2.157746_g2212_i0 | PRJEB55250 | 2335 | 428 | 2.157746 | 9.23515288 | Peredibacter | 263370 | Bacteria | Bacteria | 669 | 0 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g2212 | i0 | 94.86 | 190.707943925234 | 428 | 22 | 100 | 0 | 1 | 428 | 511270 | 511697 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 81623 | 675 | 0.991111111111111 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 21393981 | 21393981 | PRJEB55250_P_NODE_5777_length_298_cov_2.791111_g5653_i0 | PRJEB55250 | 5777 | 298 | 2.791111 | 8.31751078 | Bacteriovorax | 146784 | Bacteria | Bacteria | 507 | 4.92e-139 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g5653 | i0 | 97.315 | 307.456375838926 | 298 | 8 | 100 | 0 | 1 | 298 | 1660838 | 1660541 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 91622 | 507 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 24347679 | 24347679 | PRJEB55250_P_NODE_4560_length_326_cov_3.624506_g4436_i0 | PRJEB55250 | 4560 | 326 | 3.624506 | 11.81588956 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 553 | 6.889999999999998e-153 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g4436 | i0 | 97.531 | 27.8374233128834 | 324 | 7 | 99 | 1 | 3 | 326 | 512477 | 512155 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 9075 | 553 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 28044294 | 28044294 | PRJEB55250_P_NODE_8305_length_274_cov_1.467662_g8181_i0 | PRJEB55250 | 8305 | 274 | 1.467662 | 4.02139388 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 144 | 3.85e-39 | NR | MFA5583056.1 | 2081706 | g8181 | i0 | 78.2 | 2.89051094890511 | 87 | 19 | 95.3 | 0 | 272 | 12 | 139 | 225 | MFA5583056.1 DUF3458 domain-containing protein [Bacteriovoracaceae bacterium] | diamond | 792 | 144 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 31076351 | 31076351 | PRJEB55250_P_NODE_14135_length_246_cov_0.890173_g14011_i0 | PRJEB55250 | 14135 | 246 | 0.890173 | 2.18982558 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 82 | 2.3e-17 | NR | HXH76339.1 | 2081706 | g14011 | i0 | 87.2 | 0.573170731707317 | 47 | 6 | 57.3 | 0 | 245 | 105 | 128 | 174 | HXH76339.1 NADH-quinone oxidoreductase subunit J [Bacteriovoracaceae bacterium] | diamond | 141 | 82 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 31202138 | 31202138 | PRJEB55250_P_NODE_10455_length_258_cov_1.389189_g10331_i0 | PRJEB55250 | 10455 | 258 | 1.389189 | 3.58410762 | Bdellovibrio bacteriovorus W | 765869 | Bacteria | Bacteria | 51.2 | 1.04e-5 | NR | AHI05177.1 | 765869 | g10331 | i0 | 54.3 | 1.08139534883721 | 46 | 21 | 53.5 | 0 | 119 | 256 | 4 | 49 | AHI05177.1 transposase [Bdellovibrio bacteriovorus W] | diamond | 279 | 51.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 31866674 | 31866674 | PRJEB55250_P_NODE_8537_length_272_cov_1.547739_g8413_i0 | PRJEB55250 | 8537 | 272 | 1.547739 | 4.20985008 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 92 | 2.52e-20 | NR | MEK6554738.1 | 3034175 | g8413 | i0 | 52.3 | 1.95220588235294 | 86 | 41 | 94.9 | 0 | 258 | 1 | 90 | 175 | MEK6554738.1 hybrid sensor histidine kinase/response regulator [Bdellovibrionota bacterium] | diamond | 531 | 92 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 32625801 | 32625801 | PRJEB55250_P_NODE_11800_length_251_cov_0.865169_g11676_i0 | PRJEB55250 | 11800 | 251 | 0.865169 | 2.17157419 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 117 | 1.33e-28 | NR | MFA5584434.1 | 2081706 | g11676 | i0 | 72.3 | 0.99203187250996006 | 83 | 23 | 99.2 | 0 | 1 | 249 | 171 | 253 | MFA5584434.1 FtsX-like permease family protein [Bacteriovoracaceae bacterium] | diamond | 249 | 117 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;