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contig_metadata

12 rows where bioproject = "PRJEB55250" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJEB55250 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1396116 1396116 PRJEB55250_P_NODE_14182_length_246_cov_0.890173_g14058_i0 PRJEB55250 14182 246 0.890173 2.18982558 Acidobacteriaceae 204434 Bacteria Bacteria 129 1.84e-32   NR WP_317890955.1 940613 g14058 i0 77.5 5.82926829268293 80 18 97.6 0 6 245 462 541 WP_317890955.1 malto-oligosyltrehalose synthase [Granulicella arctica] diamond 1434 130 0.992307692307692 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Granulicella Granulicella arctica
7774346 7774346 PRJEB55250_P_NODE_8547_length_272_cov_1.537688_g8423_i0 PRJEB55250 8547 272 1.537688 4.18251136 Tunturiibacter lichenicola 2051959 Bacteria Bacteria 200 8.419999999999998e-47   NTclustered gi|2304905231|gb|CP073696.1| 2051959 g8423 i0 81.395 2.45955882352941 258 37 94 7 1 257 4911196 4911443 Tunturiibacter lichenicola strain DSM 104462 chromosome, complete genome blastn 669 200 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Tunturiibacter Tunturiibacter lichenicola
16698597 16698597 PRJEB55250_P_NODE_8414_length_273_cov_1.540000_g8290_i0 PRJEB55250 8414 273 1.54 4.2042 Bacteria 2 Bacteria Bacteria 136 3.4799999999999995e-35   NR PYS92644.1 1978231 g8290 i0 81.1 7.91208791208791 90 17 98.9 0 272 3 180 269 PYS92644.1 MAG: GTPase HflX [Acidobacteriota bacterium] diamond 2160 137 0.992700729927007 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
26615117 26615117 PRJEB55250_P_NODE_10401_length_258_cov_1.664865_g10277_i0 PRJEB55250 10401 258 1.664865 4.2953517 Pseudomonadati 3379134 Bacteria Bacteria 105 3.75e-24   NR MDQ3688301.1 1978231 g10277 i0 68.2 10.8488372093023 85 27 98.8 0 256 2 572 656 MDQ3688301.1 heavy metal translocating P-type ATPase [Acidobacteriota bacterium] diamond 2799 105 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28928376 28928376 PRJEB55250_P_NODE_9008_length_268_cov_2.548718_g8884_i0 PRJEB55250 9008 268 2.548718 6.83056424 Acidobacteriota bacterium 1978231 Bacteria Bacteria 56.2 7.03e-7   NR RLE28789.1 1978231 g8884 i0 44.9 0.772388059701492 69 37 76.1 1 53 256 52 120 RLE28789.1 MAG: hypothetical protein DRJ61_15780 [Acidobacteriota bacterium] diamond 207 56.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29149831 29149831 PRJEB55250_P_NODE_8549_length_272_cov_1.527638_g8425_i0 PRJEB55250 8549 272 1.527638 4.15517536 Candidatus Angelobacter sp. 2976921 Bacteria Bacteria 67.8 1.25e-11   NR HEY2170527.1 2976921 g8425 i0 45.5 4.22426470588235 77 39 82.7 2 4 228 77 152 HEY2170527.1 HNH endonuclease [Candidatus Angelobacter sp.] diamond 1149 67.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia     Candidatus Angelobacter Candidatus Angelobacter sp.
30539086 30539086 PRJEB55250_P_NODE_7233_length_282_cov_1.473684_g7109_i0 PRJEB55250 7233 282 1.473684 4.15578888 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 87.4 1.19e-18   NR HXI43857.1 2212468 g7109 i0 59.7 0.765957446808511 72 29 76.6 0 218 3 143 214 HXI43857.1 HNH endonuclease [Bryobacteraceae bacterium] diamond 216 87.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
31170777 31170777 PRJEB55250_P_NODE_4615_length_325_cov_1.253968_g4491_i0 PRJEB55250 4615 325 1.253968 4.075396 Terriglobales bacterium 2282142 Bacteria Bacteria 125 1.82e-33   NR MCE5310469.1 2282142 g4491 i0 55.7 0.978461538461538 106 46 96.9 1 325 11 92 197 MCE5310469.1 hypothetical protein [Terriglobales bacterium] diamond 318 125 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
31676946 31676946 PRJEB55250_P_NODE_12257_length_250_cov_0.870056_g12133_i0 PRJEB55250 12257 250 0.870056 2.17514 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 107 2.8499999999999997e-25   NR HYY56722.1 2283092 g12133 i0 70.4 7.776 81 24 97.2 0 247 5 201 281 HYY56722.1 efflux RND transporter periplasmic adaptor subunit [Pyrinomonadaceae bacterium] diamond 1944 107 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31923302 31923302 PRJEB55250_P_NODE_9557_length_264_cov_2.115183_g9433_i0 PRJEB55250 9557 264 2.115183 5.58408312 Bacteria 2 Bacteria Bacteria 96.3 8.39e-22   NR MDQ3818857.1 1978231 g9433 i0 54 6.78409090909091 87 40 98.9 0 3 263 187 273 MDQ3818857.1 glycosyltransferase family 4 protein [Acidobacteriota bacterium] diamond 1791 97.1 0.991761071060762 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31930030 31930030 PRJEB55250_P_NODE_13997_length_246_cov_0.890173_g13873_i0 PRJEB55250 13997 246 0.890173 2.18982558 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 142 1.02e-39   NR HQU84150.1 2283092 g13873 i0 82.7 3.95121951219512 81 14 98.8 0 245 3 75 155 HQU84150.1 glycerophosphodiester phosphodiesterase [Pyrinomonadaceae bacterium] diamond 972 142 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32310119 32310119 PRJEB55250_P_NODE_16599_length_241_cov_0.916667_g16475_i0 PRJEB55250 16599 241 0.916667 2.20916747 Acidobacteriota bacterium 1978231 Bacteria Bacteria 63.9 6.31e-10   NR RMH19946.1 1978231 g16475 i0 48.8 0.995850622406639 80 35 99.6 3 241 2 120 193 RMH19946.1 MAG: NAD-dependent epimerase/dehydratase family protein [Acidobacteriota bacterium] diamond 240 63.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;