RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB55250", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB55250 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26843875 26843875 PRJEB55250_P_NODE_10681_length_256_cov_1.683060_g10557_i0 PRJEB55250 10681 256 1.68306 4.3086336 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 127 2.54e-34   NR MES1909310.1 1215613 g10557 i0 67.1 0.99609375 85 21 91.4 2 2 235 138 222 MES1909310.1 hypothetical protein [Cercozoa sp. M6MM] diamond 255 127 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
28928368 28928368 PRJEB55250_P_NODE_10708_length_256_cov_1.683060_g10584_i0 PRJEB55250 10708 256 1.68306 4.3086336 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 77 7.4e-16   NR MES1912234.1 1215613 g10584 i0 50.7 1.6640625 71 32 83.2 1 228 16 52 119 MES1912234.1 hypothetical protein [Cercozoa sp. M6MM] diamond 426 77 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;