RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB55250", tax_clade = "Opisthokonta" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJEB55250 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30318491 30318491 PRJEB55250_P_NODE_14032_length_246_cov_0.890173_g13908_i0 PRJEB55250 14032 246 0.890173 2.18982558 Basidiobolus meristosporus CBS 931.73 1314790 Fungi Fungi 60.8 1.06e-8   NR ORX94118.1 1314790 g13908 i0 40.2 2.04878048780488 82 40 97.6 2 240 1 41 115 ORX94118.1 hypothetical protein K493DRAFT_195118, partial [Basidiobolus meristosporus CBS 931.73] diamond 504 60.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus meristosporus
31575531 31575531 PRJEB55250_P_NODE_6236_length_290_cov_1.788018_g6112_i0 PRJEB55250 6236 290 1.788018 5.1852522 Coemansia 4863 Fungi Fungi 104 6.61e-24   NR KAJ2350245.1 2663896 g6112 i0 50.5 5.93793103448276 95 47 98.3 0 286 2 275 369 KAJ2350245.1 nuclear localization sequence binding protein [Coemansia sp. RSA 2671] diamond 1722 104 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia sp. RSA 2671

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;