RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB55250", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Elulimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Elulimicrobiota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJEB55250 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29370526 29370526 PRJEB55250_P_NODE_4769_length_321_cov_1.862903_g4645_i0 PRJEB55250 4769 321 1.862903 5.97991863 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 87 1.29e-18   NR NBP58683.1 2802965 g4645 i0 58 0.644859813084112 69 25 64.5 1 315 109 138 202 NBP58683.1 phosphoesterase [Candidatus Elulimicrobium humile] diamond 207 87 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;