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contig_metadata

6 rows where bioproject = "PRJEB55122" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 6 ✖

bioproject 1

  • PRJEB55122 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7773729 7773729 PRJEB55122_P_NODE_40347_length_165_cov_0.896552_g39950_i0 PRJEB55122 40347 165 0.896552 1.4793108 Methanosphaera stadtmanae 2317 Archaea Archaea 52.8 0.014   NTclustered gi|1721134173|emb|LR698975.1| 2317 g39950 i0 100 0.16969696969697 28 0 17 0 17 44 1035244 1035271 Methanosphaera stadtmanae isolate MGYG-HGUT-02164 genome assembly, chromosome: 1 blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera stadtmanae
23072469 23072469 PRJEB55122_P_NODE_14659_length_307_cov_6.472868_g14262_i0 PRJEB55122 14659 307 6.472868 19.87170476 uncultured Poseidoniia archaeon 1697135 Archaea Archaea 52.8 0.029   NTclustered gi|730903793|gb|KP211874.1| 1697135 g14262 i0 100 0.0912052117263844 28 0 9 0 231 258 17130 17103 Uncultured Candidatus Thalassoarchaea euryarchaeote clone MedDCM-OCT2007-C2085 genomic sequence blastn 28 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia       uncultured Poseidoniia archaeon
26843871 26843871 PRJEB55122_P_NODE_39161_length_166_cov_1.658120_g38764_i0 PRJEB55122 39161 166 1.65812 2.7524792 archaeon 1906665 Archaea Archaea 54.7 7.02e-8   NR RYH04918.1 1906665 g38764 i0 82.4 0.614457831325301 34 6 61.4 0 165 64 64 97 RYH04918.1 MAG: 50S ribosomal protein L24 [archaeon] diamond 102 54.7 1 Archaea               archaeon
26938486 26938486 PRJEB55122_P_NODE_27582_length_202_cov_1.254902_g27185_i0 PRJEB55122 27582 202 1.254902 2.53490204 Haloarchaeobius amylolyticus 1198296 Archaea Archaea 45.8 0.0017   NR WP_267639183.1 1198296 g27185 i0 51.3 0.579207920792079 39 19 57.9 0 45 161 340 378 WP_267639183.1 DUF3179 domain-containing protein [Haloarchaeobius amylolyticus] diamond 117 45.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halorubellaceae Haloarchaeobius Haloarchaeobius amylolyticus
28833625 28833625 PRJEB55122_P_NODE_37728_length_168_cov_0.873950_g37331_i0 PRJEB55122 37728 168 0.87395 1.468236 Promethearchaeia archaeon 3067280 Archaea Archaea 45.8 0.0011   NR MFO7795213.1 3067280 g37331 i0 80 0.446428571428571 25 5 44.6 0 76 2 155 179 MFO7795213.1 reverse transcriptase family protein [Promethearchaeia archaeon] diamond 75 45.8 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
30728631 30728631 PRJEB55122_P_NODE_15454_length_296_cov_1.838057_g15057_i0 PRJEB55122 15454 296 1.838057 5.44064872 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 43.5 0.0337   NR WNZ30299.1 2026714 g15057 i0 34.4 0.912162162162162 90 52 86.1 4 11 265 178 265 WNZ30299.1 MAG: agmatinase [Candidatus Bathyarchaeota archaeon] diamond 270 43.5 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;