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contig_metadata

31 rows where bioproject = "PRJEB55122" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 31 ✖

bioproject 1

  • PRJEB55122 · 31 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1395930 1395930 PRJEB55122_P_NODE_782_length_1683_cov_3.285802_g679_i0 PRJEB55122 782 1683 3.285802 55.30004766 brine shrimp iflavirus 3 2900464 Viruses Viruses 3068 0   NTclustered gi|2209094744|gb|OL472444.1| 2900464 g679 i0 99.584 10.9881164587047 1682 7 99 0 1 1682 7539 9220 MAG: Brine shrimp iflavirus 3 isolate RUS/14-15 RNA-dependent RNA polymerase gene, complete cds blastn 18493 3068 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
2671313 2671313 PRJEB55122_P_NODE_37983_length_168_cov_0.873950_g37586_i0 PRJEB55122 37983 168 0.87395 1.468236 brine shrimp iflavirus 3 2900464 Viruses Viruses 305 9.81e-79   NTclustered gi|2209094746|gb|OL472445.1| 2900464 g37586 i0 99.405 11 168 1 100 0 1 168 1464 1631 MAG: Brine shrimp iflavirus 3 isolate KC/14 RNA-dependent RNA polymerase gene, complete cds blastn 1848 305 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
3946767 3946767 PRJEB55122_P_NODE_20924_length_241_cov_1.302083_g20527_i0 PRJEB55122 20924 241 1.302083 3.13802003 brine shrimp arlivirus 9 2900384 Viruses Viruses 283 7.07e-72   NTclustered gi|2209095198|gb|OL472417.1| 2900384 g20527 i0 87.917 0.995850622406639 240 29 99 0 2 241 10569 10330 MAG: Brine shrimp arlivirus 9 isolate ARG/02 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 240 283 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Arlivirus brine shrimp arlivirus 9
5222900 5222900 PRJEB55122_P_NODE_14225_length_315_cov_1.496241_g13828_i0 PRJEB55122 14225 315 1.496241 4.71315915 brine shrimp yue-like virus 7 2900459 Viruses Viruses 571 1.8299999999999996e-158   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g13828 i0 99.365 5 315 2 100 0 1 315 181 495 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1575 571 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
5222971 5222971 PRJEB55122_P_NODE_16345_length_284_cov_1.765957_g15948_i0 PRJEB55122 16345 284 1.765957 5.01531788 brine shrimp iflavirus 3 2900464 Viruses Viruses 520 5.98e-143   NTclustered gi|2209094746|gb|OL472445.1| 2900464 g15948 i0 99.648 11.2112676056338 284 1 100 0 1 284 3345 3628 MAG: Brine shrimp iflavirus 3 isolate KC/14 RNA-dependent RNA polymerase gene, complete cds blastn 3184 520 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
6499820 6499820 PRJEB55122_P_NODE_9606_length_418_cov_2.392954_g9212_i0 PRJEB55122 9606 418 2.392954 10.00254772 brine shrimp yue-like virus 7 2900459 Viruses Viruses 773 0   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g9212 i0 100 5 418 0 100 0 1 418 3518 3101 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 2090 773 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
7773083 7773083 PRJEB55122_P_NODE_20407_length_245_cov_1.061224_g20010_i0 PRJEB55122 20407 245 1.061224 2.5999988 brine shrimp yue-like virus 7 2900459 Viruses Viruses 453 5.1900000000000006e-123   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g20010 i0 100 5 245 0 100 0 1 245 5246 5002 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1225 453 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
15423040 15423040 PRJEB55122_P_NODE_20413_length_245_cov_0.994898_g20016_i0 PRJEB55122 20413 245 0.994898 2.4375001 brine shrimp yue-like virus 7 2900459 Viruses Viruses 442 1.1199999999999994e-119   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g20016 i0 99.184 5 245 2 100 0 1 245 4777 4533 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1225 442 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
15423401 15423401 PRJEB55122_P_NODE_30893_length_188_cov_1.892086_g30496_i0 PRJEB55122 30893 188 1.892086 3.55712168 Artemvirus bsasecalis 3426461 Viruses Viruses 220 4.17e-53   NTclustered gi|2209095120|gb|OL472404.1| 2900377 g30496 i0 87.766 1 188 23 100 0 1 188 7062 7249 MAG: Brine shrimp arlivirus 2 isolate PC hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 188 220 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsasecalis
16697335 16697335 PRJEB55122_P_NODE_20514_length_244_cov_1.323077_g20117_i0 PRJEB55122 20514 244 1.323077 3.22830788 brine shrimp arlivirus 9 2900384 Viruses Viruses 219 2.05e-52   NTclustered gi|2209095198|gb|OL472417.1| 2900384 g20117 i0 83.264 0.979508196721312 239 38 97 2 3 239 11050 11288 MAG: Brine shrimp arlivirus 9 isolate ARG/02 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 239 219 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Arlivirus brine shrimp arlivirus 9
17972000 17972000 PRJEB55122_P_NODE_12755_length_340_cov_2.323024_g12358_i0 PRJEB55122 12755 340 2.323024 7.8982816 brine shrimp yue-like virus 7 2900459 Viruses Viruses 628 1.1699999999999999e-175   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g12358 i0 100 5 340 0 100 0 1 340 5616 5277 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1700 628 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
19246338 19246338 PRJEB55122_P_NODE_23676_length_222_cov_2.156069_g23279_i0 PRJEB55122 23676 222 2.156069 4.78647318 brine shrimp iflavirus 3 2900464 Viruses Viruses 399 6.099999999999999e-107   NTclustered gi|2209094746|gb|OL472445.1| 2900464 g23279 i0 99.099 11 222 2 100 0 1 222 7275 7496 MAG: Brine shrimp iflavirus 3 isolate KC/14 RNA-dependent RNA polymerase gene, complete cds blastn 2442 399 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
19246366 19246366 PRJEB55122_P_NODE_24376_length_218_cov_1.846154_g23979_i0 PRJEB55122 24376 218 1.846154 4.02461572 brine shrimp yue-like virus 7 2900459 Viruses Viruses 403 4.62e-108   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g23979 i0 100 5 218 0 100 0 1 218 6470 6687 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1090 403 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
20522115 20522115 PRJEB55122_P_NODE_37297_length_168_cov_1.747899_g36900_i0 PRJEB55122 37297 168 1.747899 2.93647032 brine shrimp yue-like virus 7 2900459 Viruses Viruses 311 2.11e-80   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g36900 i0 100 5 168 0 100 0 1 168 5871 6038 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 840 311 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
21797457 21797457 PRJEB55122_P_NODE_23158_length_225_cov_1.772727_g22761_i0 PRJEB55122 23158 225 1.772727 3.98863575 brine shrimp yue-like virus 7 2900459 Viruses Viruses 416 6.159999999999998e-112   NTclustered gi|2209095278|gb|OL472843.1| 2900459 g22761 i0 100 5.13333333333333 225 0 100 0 1 225 133 357 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 2 hypothetical protein gene, complete cds blastn 1155 416 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
23073046 23073046 PRJEB55122_P_NODE_31019_length_188_cov_1.215827_g30622_i0 PRJEB55122 31019 188 1.215827 2.28575476 brine shrimp yue-like virus 7 2900459 Viruses Viruses 342 8.539999999999999e-90   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g30622 i0 99.468 5 188 1 100 0 1 188 2588 2775 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 940 342 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
23073507 23073507 PRJEB55122_P_NODE_679_length_1761_cov_4.870911_g583_i0 PRJEB55122 679 1761 4.870911 85.77674271 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 364 2.6099999999999994e-110   NR XCM67838.1 3003959 g583 i0 36.6 0.926746166950596 544 318 91.7 7 1761 148 499 1021 XCM67838.1 MAG: structural polyprotein [Picornavirales sp.] diamond 1632 364 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
24346929 24346929 PRJEB55122_P_NODE_31740_length_185_cov_1.529412_g31343_i0 PRJEB55122 31740 185 1.529412 2.8294122 brine shrimp arlivirus 9 2900384 Viruses Viruses 193 8.919999999999999e-45   NTclustered gi|2209095198|gb|OL472417.1| 2900384 g31343 i0 85.405 1 185 27 100 0 1 185 7909 8093 MAG: Brine shrimp arlivirus 9 isolate ARG/02 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 185 193 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Arlivirus brine shrimp arlivirus 9
26716623 26716623 PRJEB55122_P_NODE_5681_length_611_cov_2.076512_g5304_i0 PRJEB55122 5681 611 2.076512 12.68748832 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 171 2.23e-45   NR XCM67838.1 3003959 g5304 i0 46.6 1.01145662847791 206 92 98.2 4 611 12 322 515 XCM67838.1 MAG: structural polyprotein [Picornavirales sp.] diamond 618 171 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
26843864 26843864 PRJEB55122_P_NODE_20821_length_242_cov_1.077720_g20424_i0 PRJEB55122 20821 242 1.07772 2.6080824 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 88.2 3.76e-18   NR XCM67837.1 3003959 g20424 i0 50 0.966942148760331 78 39 96.7 0 236 3 1076 1153 XCM67837.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 234 88.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
26843866 26843866 PRJEB55122_P_NODE_27061_length_204_cov_2.012903_g26664_i0 PRJEB55122 27061 204 2.012903 4.10632212 Fusarium culmorum yue-like virus 1 3233859 Viruses Viruses 55.8 5.28e-7   NR XCO56027.1 3233859 g26664 i0 43.3 1.97058823529412 67 36 98.5 1 3 203 471 535 XCO56027.1 MAG: putative RNA-dependent RNA polymerase [Fusarium culmorum yue-like virus 1] diamond 402 55.8 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   Fusarium culmorum yue-like virus 1
26907039 26907039 PRJEB55122_P_NODE_14202_length_315_cov_2.255639_g13805_i0 PRJEB55122 14202 315 2.255639 7.10526285 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 110 1.07e-25   NR XCM67837.1 3003959 g13805 i0 51.5 1.92380952380952 101 49 96.2 0 11 313 1340 1440 XCM67837.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 606 110 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
27096729 27096729 PRJEB55122_P_NODE_11122_length_376_cov_0.914373_g10725_i0 PRJEB55122 11122 376 0.914373 3.43804248 brine shrimp arlivirus 9 2900384 Viruses Viruses 246 9.28e-73   NR UNI74144.1 2900384 g10725 i0 89.6 0.997340425531915 125 13 99.7 0 2 376 92 216 UNI74144.1 MAG: RNA-dependent RNA polymerase [brine shrimp arlivirus 9] diamond 375 246 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Arlivirus brine shrimp arlivirus 9
27570658 27570658 PRJEB55122_P_NODE_9084_length_436_cov_1.596899_g8690_i0 PRJEB55122 9084 436 1.596899 6.96247964 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 90.1 8.81e-18   NR XCM68108.1 3003959 g8690 i0 40.3 0.818807339449541 119 65 80.5 2 3 353 60 174 XCM68108.1 MAG: structural polyprotein [Picornavirales sp.] diamond 357 90.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
28359880 28359880 PRJEB55122_P_NODE_34086_length_177_cov_1.218750_g33689_i0 PRJEB55122 34086 177 1.21875 2.1571875 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 86.3 7.29e-18   NR XCM67837.1 3003959 g33689 i0 64.4 1 59 21 100 0 177 1 566 624 XCM67837.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 177 86.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
28738955 28738955 PRJEB55122_P_NODE_16547_length_282_cov_1.223176_g16150_i0 PRJEB55122 16547 282 1.223176 3.44935632 Fusarium culmorum yue-like virus 1 3233859 Viruses Viruses 48.9 4.19e-4   NR XCO56027.1 3233859 g16150 i0 35.6 0.925531914893617 87 56 92.6 0 1 261 595 681 XCO56027.1 MAG: putative RNA-dependent RNA polymerase [Fusarium culmorum yue-like virus 1] diamond 261 48.9 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   Fusarium culmorum yue-like virus 1
29433253 29433253 PRJEB55122_P_NODE_35110_length_173_cov_2.096774_g34713_i0 PRJEB55122 35110 173 2.096774 3.62741902 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 69.7 4.48e-12   NR XCM67837.1 3003959 g34713 i0 60.4 1.83815028901734 53 21 91.9 0 172 14 1708 1760 XCM67837.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 318 69.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
31234049 31234049 PRJEB55122_P_NODE_8655_length_451_cov_1.373134_g8261_i0 PRJEB55122 8655 451 1.373134 6.19283434 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 250 8.53e-74   NR XCM67837.1 3003959 g8261 i0 72 0.997782705099778 150 42 99.8 0 451 2 1433 1582 XCM67837.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 450 250 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
31898468 31898468 PRJEB55122_P_NODE_26317_length_208_cov_1.308176_g25920_i0 PRJEB55122 26317 208 1.308176 2.72100608 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 74.3 1.76e-13   NR XCM68108.1 3003959 g25920 i0 60.3 0.980769230769231 68 23 93.8 3 14 208 678 744 XCM68108.1 MAG: structural polyprotein [Picornavirales sp.] diamond 204 74.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
31930026 31930026 PRJEB55122_P_NODE_9237_length_431_cov_1.463351_g8843_i0 PRJEB55122 9237 431 1.463351 6.3070428100000004 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 104 8.919999999999999e-23   NR XCM68108.1 3003959 g8843 i0 46.3 0.751740139211137 108 57 75.2 1 31 354 881 987 XCM68108.1 MAG: structural polyprotein [Picornavirales sp.] diamond 324 104 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
32563178 32563178 PRJEB55122_P_NODE_32119_length_184_cov_1.155556_g31722_i0 PRJEB55122 32119 184 1.155556 2.12622304 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 84.3 3.78e-17   NR XCM67837.1 3003959 g31722 i0 60.7 0.994565217391304 61 24 99.5 0 2 184 1582 1642 XCM67837.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 183 84.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;