RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB55122", tax_kingdom = "Metazoa" and tax_phylum = "Brachiopoda"

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tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB55122 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6498999 6498999 PRJEB55122_P_NODE_2366_length_1031_cov_4.912424_g2131_i0 PRJEB55122 2366 1031 4.912424 50.64709144 Lingula anatina 7574 Brachiopoda other_Eukaryota 377 7.29e-127   NR XP_013409929.1 7574 g2131 i0 61.3 2.47914645974782 287 107 82.3 2 941 93 56 342 XP_013409929.1 cathepsin B [Lingula anatina] diamond 2556 377 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
6499691 6499691 PRJEB55122_P_NODE_606_length_1842_cov_4.447853_g519_i0 PRJEB55122 606 1842 4.447853 81.92945226 Opisthokonta 33154 Brachiopoda other_Eukaryota 595 4.44e-204   NR XP_013400629.1 7574 g519 i0 61 152.785016286645 497 177 78.2 2 1837 398 103 599 XP_013400629.1 heat shock cognate 71 kDa protein [Lingula anatina] diamond 281430 601 0.990016638935108 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
30981626 30981626 PRJEB55122_P_NODE_36214_length_170_cov_1.289256_g35817_i0 PRJEB55122 36214 170 1.289256 2.1917352 Lingula anatina 7574 Brachiopoda other_Eukaryota 97.4 6.1e-23   NR XP_013420344.1 7574 g35817 i0 80.4 4.92352941176471 56 11 98.8 0 168 1 52 107 XP_013420344.1 protein SET [Lingula anatina] diamond 837 97.4 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;