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contig_metadata

17 rows where bioproject = "PRJEB55122", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 17 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 17 ✖

bioproject 1

  • PRJEB55122 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2267035 2267035 PRJEB55122_P_NODE_6562_length_550_cov_2.069860_g6176_i0 PRJEB55122 6562 550 2.06986 11.38423 Metazoa 33208 Nematoda Nematoda 1016 0   NTclustered gi|158821895|gb|EU195959.1| 479134 g6176 i0 100 74.6472727272727 550 0 100 0 1 550 1349 1898 Diploscapter sp. JU359 28S ribosomal RNA gene, partial sequence blastn 41056 1016 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter sp. JU359
9048633 9048633 PRJEB55122_P_NODE_44008_length_159_cov_2.263636_g43611_i0 PRJEB55122 44008 159 2.263636 3.59918124 Caenorhabditis elegans 6239 Nematoda Nematoda 215 1.59e-51   NTclustered gi|1972264646|ref|NM_066119.9| 6239 g43611 i0 91.139 89.8993710691824 158 14 99 0 1 158 369 526 Caenorhabditis elegans Elongation factor 1-alpha (eef-1A.1), mRNA blastn 14294 215 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
10324263 10324263 PRJEB55122_P_NODE_38389_length_167_cov_0.881356_g37992_i0 PRJEB55122 38389 167 0.881356 1.47186452 Diploscapter pachys 2018661 Nematoda Nematoda 86.3 2.4e-18   NR PAV77129.1 2018661 g37992 i0 100 1.94011976047904 36 0 64.7 0 167 60 71 106 PAV77129.1 hypothetical protein WR25_14227 [Diploscapter pachys] diamond 324 86.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
19246851 19246851 PRJEB55122_P_NODE_39856_length_166_cov_0.888889_g39459_i0 PRJEB55122 39856 166 0.888889 1.47555574 Diploscapter pachys 2018661 Nematoda Nematoda 113 2.799999999999999e-29   NR PAV77213.1 2018661 g39459 i0 100 0.993975903614458 55 0 99.4 0 2 166 204 258 PAV77213.1 hypothetical protein WR25_12777 [Diploscapter pachys] diamond 165 113 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
23073551 23073551 PRJEB55122_P_NODE_7959_length_478_cov_1.312354_g7567_i0 PRJEB55122 7959 478 1.312354 6.27305212 Caenorhabditis elegans 6239 Nematoda Nematoda 182 5.69e-41   NTclustered gi|1972261274|ref|NM_001384026.2| 6239 g7567 i0 80.591 17.907949790795 237 44 49 2 221 456 138 373 Caenorhabditis elegans ATP synthase c subunit (Y82E9BR.3), mRNA blastn 8560 182 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
26748228 26748228 PRJEB55122_P_NODE_39621_length_166_cov_0.888889_g39224_i0 PRJEB55122 39621 166 0.888889 1.47555574 Diploscapter pachys 2018661 Nematoda Nematoda 115 2.37e-28   NR PAV57811.1 2018661 g39224 i0 100 0.993975903614458 55 0 99.4 0 165 1 1416 1470 PAV57811.1 hypothetical protein WR25_20143 [Diploscapter pachys] diamond 165 115 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
27343138 27343138 PRJEB55122_P_NODE_28103_length_200_cov_0.960265_g27706_i0 PRJEB55122 28103 200 0.960265 1.92053 Opisthokonta 33154 Nematoda Nematoda 98.2 6.29e-22   NR MCP9264969.1 6287 g27706 i0 69.7 15.84 66 20 99 0 200 3 827 892 MCP9264969.1 60S ribosomal protein L10 [Dirofilaria immitis] diamond 3168 98.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis
28290002 28290002 PRJEB55122_P_NODE_42306_length_163_cov_0.912281_g41909_i0 PRJEB55122 42306 163 0.912281 1.48701803 Caenorhabditis 6237 Nematoda Nematoda 45.4 0.00136   NR NP_001366874.1 6239 g41909 i0 48 1.84049079754601 50 26 92 0 10 159 158 207 NP_001366874.1 START domain-containing protein [Caenorhabditis elegans] diamond 300 45.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
28707479 28707479 PRJEB55122_P_NODE_37127_length_169_cov_0.866667_g36730_i0 PRJEB55122 37127 169 0.866667 1.46466723 Diploscapter pachys 2018661 Nematoda Nematoda 71.6 2.1e-13   NR PAV65475.1 2018661 g36730 i0 94.3 1.24260355029586 35 2 62.1 0 1 105 187 221 PAV65475.1 hypothetical protein WR25_26935 [Diploscapter pachys] diamond 210 71.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
29749012 29749012 PRJEB55122_P_NODE_39411_length_166_cov_0.888889_g39014_i0 PRJEB55122 39411 166 0.888889 1.47555574 Diploscapter pachys 2018661 Nematoda Nematoda 107 2.53e-26   NR PAV58625.1 2018661 g39014 i0 98.2 0.993975903614458 55 1 99.4 0 166 2 257 311 PAV58625.1 hypothetical protein WR25_06144 [Diploscapter pachys] diamond 165 107 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
30033675 30033675 PRJEB55122_P_NODE_34411_length_176_cov_1.228346_g34014_i0 PRJEB55122 34411 176 1.228346 2.16188896 Pristionchus fissidentatus 1538716 Nematoda Nematoda 62.4 7.77e-11   NR GMT14341.1 1538716 g34014 i0 65.2 0.784090909090909 46 16 78.4 0 8 145 53 98 GMT14341.1 hypothetical protein PFISCL1PPCAC_5638, partial [Pristionchus fissidentatus] diamond 138 62.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
30223075 30223075 PRJEB55122_P_NODE_41812_length_164_cov_0.904348_g41415_i0 PRJEB55122 41812 164 0.904348 1.48313072 Caenorhabditis angaria 860376 Nematoda Nematoda 70.1 6.02e-13   NR CAI5438963.1 860376 g41415 i0 69.8 1.9390243902439 53 16 97 0 6 164 154 206 CAI5438963.1 unnamed protein product [Caenorhabditis angaria] diamond 318 70.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis angaria
31076348 31076348 PRJEB55122_P_NODE_43435_length_162_cov_0.920354_g43038_i0 PRJEB55122 43435 162 0.920354 1.49097348 Diploscapter pachys 2018661 Nematoda Nematoda 89 1.38e-19   NR PAV58996.1 2018661 g43038 i0 100 1.51851851851852 41 0 75.9 0 161 39 60 100 PAV58996.1 hypothetical protein WR25_12840 isoform B [Diploscapter pachys] diamond 246 89 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
31170761 31170761 PRJEB55122_P_NODE_28575_length_197_cov_2.540541_g28178_i0 PRJEB55122 28575 197 2.540541 5.00486577 Strongyloides ratti 34506 Nematoda Nematoda 44.3 0.00107   NR XP_024500773.1 34506 g28178 i0 64.3 2.74111675126904 28 10 42.6 0 98 181 42 69 XP_024500773.1 Hypothetical protein SRAE_0000068266 [Strongyloides ratti] diamond 540 44.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
31582287 31582287 PRJEB55122_P_NODE_24156_length_219_cov_2.205882_g23759_i0 PRJEB55122 24156 219 2.205882 4.83088158 Dracunculus medinensis 318479 Nematoda Nematoda 42.4 0.00573   NR VDN50396.1 318479 g23759 i0 35.7 0.958904109589041 70 45 95.9 0 3 212 2 71 VDN50396.1 unnamed protein product [Dracunculus medinensis] diamond 210 42.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Dracunculidae Dracunculus Dracunculus medinensis
32278364 32278364 PRJEB55122_P_NODE_41059_length_164_cov_1.460870_g40662_i0 PRJEB55122 41059 164 1.46087 2.3958268 Diploscapter pachys 2018661 Nematoda Nematoda 64.7 2.27e-10   NR PAV59389.1 2018661 g40662 i0 93.3 1.09756097560976 30 2 54.9 0 164 75 103 132 PAV59389.1 hypothetical protein WR25_03514 [Diploscapter pachys] diamond 180 64.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
32657067 32657067 PRJEB55122_P_NODE_21280_length_238_cov_2.407407_g20883_i0 PRJEB55122 21280 238 2.407407 5.72962866 Aphelenchoides avenae 70226 Nematoda Nematoda 43.5 0.0124   NR KAH7731325.1 70226 g20883 i0 33.3 0.831932773109244 66 39 76.9 1 36 218 16 81 KAH7731325.1 CBN-GOS-28 protein [Aphelenchoides avenae] diamond 198 43.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;