RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB50765" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB50765 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9046788 9046788 PRJEB50765_P_NODE_2688_length_170_cov_1.368421_g2664_i0 PRJEB50765 2688 170 1.368421 2.3263157 Xenia sp. Carnegie-2 86540 Cnidaria other_Eukaryota 94.7 6.37e-22   NR XP_046861573.1 2897299 g2664 i0 71.4 3.95294117647059 56 16 98.8 0 168 1 184 239 XP_046861573.1 60S ribosomal protein L27a-like [Xenia sp. Carnegie-2017] diamond 672 94.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
32176676 32176676 PRJEB50765_P_NODE_2458_length_180_cov_1.083916_g2434_i0 PRJEB50765 2458 180 1.083916 1.9510488 Opisthokonta 33154 Cnidaria other_Eukaryota 45.8 4.02e-4   NR XP_065681520.1 6087 g2434 i0 62.5 1.05 32 12 53.3 0 15 110 3 34 XP_065681520.1 uncharacterized protein LOC136095179 [Hydra vulgaris] diamond 189 46.2 0.991341991341991 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
32720390 32720390 PRJEB50765_P_NODE_2200_length_191_cov_1.987013_g2176_i0 PRJEB50765 2200 191 1.987013 3.79519483 Nematostella vectensis 45351 Cnidaria other_Eukaryota 79.3 1.38e-15   NR XP_001626688.3 45351 g2176 i0 61.9 3.95811518324607 63 24 99 0 189 1 194 256 XP_001626688.3 cathepsin B [Nematostella vectensis] diamond 756 79.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;