RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB50765" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB50765 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5221968 5221968 PRJEB50765_P_NODE_2705_length_169_cov_1.984848_g2681_i0 PRJEB50765 2705 169 1.984848 3.35439312 Chytriomyces 109882 Fungi Fungi 99 3.53e-24   NR TPX69010.1 246404 g2681 i0 82.1 4.97041420118343 56 10 99.4 0 169 2 82 137 TPX69010.1 hypothetical protein CcCBS67573_g06961 [Chytriomyces confervae] diamond 840 99 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces confervae
27469358 27469358 PRJEB50765_P_NODE_2343_length_185_cov_1.033784_g2319_i0 PRJEB50765 2343 185 1.033784 1.9125004 Opisthokonta 33154 Fungi Fungi 82.8 1.32e-16   NR KAJ3244008.1 4814 g2319 i0 68.4 43.9621621621622 57 18 92.4 0 173 3 18 74 KAJ3244008.1 T-complex protein 1 subunit delta [Chytriomyces hyalinus] diamond 8133 83.6 0.990430622009569 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
29843999 29843999 PRJEB50765_P_NODE_3111_length_156_cov_0.983193_g3087_i0 PRJEB50765 3111 156 0.983193 1.53378108 Globomyces pollinis-pini 382532 Fungi Fungi 58.2 4.23e-8   NR KAI8893489.1 382532 g3087 i0 53.8 2 52 24 100 0 156 1 462 513 KAI8893489.1 P-loop containing nucleoside triphosphate hydrolase protein [Globomyces pollinis-pini] diamond 312 58.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Globomycetaceae Globomyces Globomyces pollinis-pini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;