RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB50765", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB50765 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9046796 9046796 PRJEB50765_P_NODE_628_length_437_cov_1.177500_g604_i0 PRJEB50765 628 437 1.1775 5.145675 Metazoa 33208 Echinodermata other_Eukaryota 181 5.609999999999999e-54   NR XP_041462087.1 7654 g604 i0 59.9 31.2494279176201 147 57 99.5 1 2 436 5 151 XP_041462087.1 40S ribosomal protein S3a-like [Lytechinus variegatus] diamond 13656 182 0.994505494505495 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
31487457 31487457 PRJEB50765_P_NODE_2796_length_166_cov_1.139535_g2772_i0 PRJEB50765 2796 166 1.139535 1.8916281 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 42 0.0242   NR XP_030850438.1 7668 g2772 i0 53.8 1.44578313253012 39 17 68.7 1 162 49 220 258 XP_030850438.1 40S ribosomal protein S4 [Strongylocentrotus purpuratus] diamond 240 42 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;