RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJEB50332" and tax_phylum = "Minisyncoccota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB50332 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27665570 27665570 PRJEB50332_P_NODE_12704_length_211_cov_0.866667_g12622_i0 PRJEB50332 12704 211 0.866667 1.82866737 Minisyncoccota bacterium 2053589 Bacteria Bacteria 71.2 2.19e-12   NR MDR3548433.1 2053589 g12622 i0 50.7 1.97630331753555 69 33 98.1 1 207 1 118 185 MDR3548433.1 HAD-IC family P-type ATPase [Candidatus Paceibacterota bacterium] diamond 417 71.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27917894 27917894 PRJEB50332_P_NODE_9985_length_224_cov_2.085890_g9903_i0 PRJEB50332 9985 224 2.08589 4.6723936 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.9 0.0116   NR HRY51239.1 2053589 g9903 i0 39.1 2.49107142857143 64 35 80.4 1 2 181 49 112 HRY51239.1 PQQ-binding-like beta-propeller repeat protein [Candidatus Paceibacterota bacterium] diamond 558 43.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;