contig_metadata
8 rows where bioproject = "PRJEB50332", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15019057 | 15019057 | PRJEB50332_P_NODE_11912_length_214_cov_1.352941_g11830_i0 | PRJEB50332 | 11912 | 214 | 1.352941 | 2.89529374 | Archangium | 47 | Bacteria | Bacteria | 161 | 3e-35 | NTclustered | gi|2579687829|gb|CP043494.1| | 83450 | g11830 | i0 | 81.281 | 6.49532710280374 | 203 | 34 | 94 | 4 | 1 | 201 | 2331403 | 2331603 | Archangium minus strain Cbm 6 chromosome, complete genome | blastn | 1390 | 161 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium minus | ||
| 28069106 | 28069106 | PRJEB50332_P_NODE_7825_length_237_cov_1.107955_g7743_i0 | PRJEB50332 | 7825 | 237 | 1.107955 | 2.62585335 | root | 1 | Root_unresolved | Root_unresolved | 80.5 | 1.61e-15 | NR | WP_129344401.1 | 56 | g7743 | i0 | 53.9 | 11.3164556962025 | 76 | 34 | 94.9 | 1 | 227 | 3 | 204 | 279 | WP_129344401.1 M20 family metallopeptidase [Sorangium cellulosum] | diamond | 2682 | 80.9 | 0.995055624227441 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 28139275 | 28139275 | PRJEB50332_P_NODE_8865_length_231_cov_1.282353_g8783_i0 | PRJEB50332 | 8865 | 231 | 1.282353 | 2.96223543 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 164 | 3.34e-46 | NR | MBL9027325.1 | 2026763 | g8783 | i0 | 96.1 | 0.987012987012987 | 76 | 3 | 98.7 | 0 | 229 | 2 | 249 | 324 | MBL9027325.1 outer membrane protein transport protein [Myxococcales bacterium] | diamond | 228 | 164 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 29212702 | 29212702 | PRJEB50332_P_NODE_11929_length_214_cov_1.274510_g11847_i0 | PRJEB50332 | 11929 | 214 | 1.27451 | 2.7274514 | Bradymonadia bacterium | 3121696 | Bacteria | Bacteria | 92.8 | 1.57e-20 | NR | MFT6396027.1 | 3121696 | g11847 | i0 | 75 | 3.14018691588785 | 56 | 14 | 78.5 | 0 | 170 | 3 | 3 | 58 | MFT6396027.1 malate dehydrogenase [Bradymonadia bacterium] | diamond | 672 | 92.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Bradymonadia | Bradymonadia bacterium | |||||
| 30381495 | 30381495 | PRJEB50332_P_NODE_4193_length_291_cov_1.469565_g4111_i0 | PRJEB50332 | 4193 | 291 | 1.469565 | 4.27643415 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 86.3 | 2.04e-19 | NR | MCA9640749.1 | 2026763 | g4111 | i0 | 83.3 | 0.556701030927835 | 54 | 9 | 55.7 | 0 | 1 | 162 | 58 | 111 | MCA9640749.1 hypothetical protein [Myxococcales bacterium] | diamond | 162 | 86.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 30500759 | 30500759 | PRJEB50332_P_NODE_18313_length_194_cov_2.571429_g18231_i0 | PRJEB50332 | 18313 | 194 | 2.571429 | 4.98857226 | Archangiaceae | 39 | Bacteria | Bacteria | 42.4 | 0.0269 | NR | WP_157232090.1 | 394096 | g18231 | i0 | 51.2 | 2.52061855670103 | 43 | 20 | 66.5 | 1 | 61 | 189 | 559 | 600 | WP_157232090.1 hypothetical protein [Hyalangium minutum] | diamond | 489 | 42.7 | 0.992974238875878 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Hyalangium | Hyalangium minutum | ||
| 30728603 | 30728603 | PRJEB50332_P_NODE_7974_length_236_cov_1.314286_g7892_i0 | PRJEB50332 | 7974 | 236 | 1.314286 | 3.10171496 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 56.2 | 5.36e-7 | NR | MEZ4444961.1 | 2268199 | g7892 | i0 | 46.5 | 1.83050847457627 | 71 | 36 | 89 | 2 | 210 | 1 | 52 | 121 | MEZ4444961.1 endonuclease/exonuclease/phosphatase family protein [Polyangiaceae bacterium] | diamond | 432 | 56.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 31638536 | 31638536 | PRJEB50332_P_NODE_1856_length_412_cov_1.293447_g1775_i0 | PRJEB50332 | 1856 | 412 | 1.293447 | 5.32900164 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 96.3 | 9.27e-21 | NR | TNE50174.1 | 2026735 | g1775 | i0 | 43.3 | 3.13106796116505 | 97 | 54 | 69.9 | 1 | 18 | 305 | 181 | 277 | TNE50174.1 MAG: hypothetical protein EP343_09595 [Deltaproteobacteria bacterium] | diamond | 1290 | 97.1 | 0.991761071060762 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;