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contig_metadata

8 rows where bioproject = "PRJEB50332" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 8 ✖

tax_clade 1

bioproject 1

  • PRJEB50332 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7771902 7771902 PRJEB50332_P_NODE_6407_length_247_cov_4.602151_g6325_i0 PRJEB50332 6407 247 4.602151 11.36731297 uncultured euryarchaeote 114243 Archaea Archaea 220 5.78e-53   NTclustered gi|523540504|gb|KC753316.1| 114243 g6325 i0 98.4 66.7692307692308 125 2 87 0 1 125 766 642 Uncultured euryarchaeote clone W1A-33 16S ribosomal RNA gene, partial sequence blastn 16492 220 1 Archaea   Methanobacteriati Methanobacteriota         uncultured euryarchaeote
13744734 13744734 PRJEB50332_P_NODE_5491_length_262_cov_6.233831_g5409_i0 PRJEB50332 5491 262 6.233831 16.33263722 Methanobacteriati 3366610 Archaea Archaea 233 7.949999999999999e-57   NTclustered gi|229611423|emb|FN391210.2| 114243 g5409 i0 100 90.8854961832061 126 0 96 0 137 262 748 873 Uncultured euryarchaeote partial 16S rRNA gene, clone 209ZF03 blastn 23812 233 1 Archaea   Methanobacteriati Methanobacteriota         uncultured euryarchaeote
16294032 16294032 PRJEB50332_P_NODE_6433_length_247_cov_1.930108_g6351_i0 PRJEB50332 6433 247 1.930108 4.76736676 root 1 Root_unresolved Root_unresolved 231 2.6699999999999997e-56   NTclustered gi|558508638|ref|NR_104562.1| 106207 g6351 i0 100 96.6194331983806 125 0 100 0 1 125 813 689 Methanocalculus taiwanensis strain P2F9704a 16S ribosomal RNA, partial sequence blastn 23865 233 0.991416309012876 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocalculaceae Methanocalculus Methanocalculus taiwanensis
17569158 17569158 PRJEB50332_P_NODE_6414_length_247_cov_2.919355_g6332_i0 PRJEB50332 6414 247 2.919355 7.21080685 Halobacterium 2239 Archaea Archaea 239 1.6e-58   NTclustered gi|2442661848|gb|OQ423262.1| 2242 g6332 i0 98.529 105.599190283401 136 0 100 2 114 247 702 837 Halobacterium salinarum strain 62A 16S ribosomal RNA gene, partial sequence blastn 26083 239 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium salinarum
19245058 19245058 PRJEB50332_P_NODE_5496_length_262_cov_3.507463_g5414_i0 PRJEB50332 5496 262 3.507463 9.18955306 uncultured euryarchaeote 114243 Archaea Archaea 228 3.7e-55   NTclustered gi|190342243|gb|EU731289.1| 114243 g5414 i0 99.206 59.7595419847328 126 1 96 0 1 126 824 699 Uncultured euryarchaeote clone GNA02H07 16S ribosomal RNA gene, partial sequence blastn 15657 228 1 Archaea   Methanobacteriati Methanobacteriota         uncultured euryarchaeote
27001676 27001676 PRJEB50332_P_NODE_8202_length_234_cov_2.439306_g8120_i0 PRJEB50332 8202 234 2.439306 5.70797604 Halococcus 2249 Archaea Archaea 103 9.03e-26   NR WP_049909806.1 2249 g8120 i0 66.2 0.987179487179487 77 26 98.7 0 234 4 6 82 WP_049909806.1 MULTISPECIES: hypothetical protein [Halococcus] diamond 231 103 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus  
28928336 28928336 PRJEB50332_P_NODE_2808_length_343_cov_0.819149_g2726_i0 PRJEB50332 2808 343 0.819149 2.80968107 Methanobacteriota archaeon 2026739 Archaea Archaea 73.6 3.74e-13   NR RMG30150.1 2026739 g2726 i0 38.3 1.74052478134111 94 57 82.2 1 337 56 130 222 RMG30150.1 MAG: aquaporin [Methanobacteriota archaeon] diamond 597 73.6 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29054810 29054810 PRJEB50332_P_NODE_15868_length_205_cov_1.354167_g15786_i0 PRJEB50332 15868 205 1.354167 2.77604235 Halomicrobium katesii 437163 Archaea Archaea 47.4 5.18e-4   NR WP_018257875.1 437163 g15786 i0 36.4 0.965853658536585 66 42 96.6 0 205 8 160 225 WP_018257875.1 ArsA family ATPase [Halomicrobium katesii] diamond 198 47.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halomicrobium Halomicrobium katesii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;