RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB50332", tax_kingdom = "Metazoa" and tax_phylum = "Ctenophora"

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tax_superkingdom 1

tax_phylum 1

  • Ctenophora · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB50332 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28549675 28549675 PRJEB50332_P_NODE_8487_length_233_cov_1.511628_g8405_i0 PRJEB50332 8487 233 1.511628 3.52209324 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 65.5 3.15e-10   NR XP_063678896.1 2820187 g8405 i0 43.4 0.978540772532189 76 37 97.9 4 6 233 161 230 XP_063678896.1 sphingomyelin phosphodiesterase-like [Bolinopsis microptera] diamond 228 65.5 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
32310079 32310079 PRJEB50332_P_NODE_7719_length_237_cov_1.642045_g7637_i0 PRJEB50332 7719 237 1.642045 3.89164665 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 43.9 0.0125   NR XP_063683804.1 2820187 g7637 i0 35.4 1.67088607594937 48 31 60.8 0 233 90 112 159 XP_063683804.1 heterogeneous nuclear ribonucleoprotein D-like isoform X2 [Bolinopsis microptera] diamond 396 43.9 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;