RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB50332", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB50332 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11194597 11194597 PRJEB50332_P_NODE_2349_length_368_cov_2.781759_g2268_i0 PRJEB50332 2349 368 2.781759 10.23687312 Fungi 4751 Fungi Fungi 121 7.54e-33   NR KAI9221418.1 64508 g2268 i0 59.8 4.7445652173913 97 39 79.1 0 345 55 14 110 KAI9221418.1 60S ribosomal protein L30 [Blastocladiella britannica] diamond 1746 122 0.991803278688525 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
28296745 28296745 PRJEB50332_P_NODE_3026_length_331_cov_6.166667_g2944_i0 PRJEB50332 3026 331 6.166667 20.41166777 Catenaria anguillulae PL171 765915 Fungi Fungi 99.4 4.0399999999999996e-24   NR ORZ39709.1 765915 g2944 i0 49 1.90332326283988 102 52 92.4 0 25 330 6 107 ORZ39709.1 ribosomal protein L14-domain-containing protein [Catenaria anguillulae PL171] diamond 630 99.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
32373204 32373204 PRJEB50332_P_NODE_12099_length_213_cov_1.282895_g12017_i0 PRJEB50332 12099 213 1.282895 2.73256635 Catenaria anguillulae PL171 765915 Fungi Fungi 84.7 3.95e-17   NR ORZ31340.1 765915 g12017 i0 55.1 0.971830985915493 69 31 97.2 0 208 2 99 167 ORZ31340.1 aminopeptidase I zinc metalloprotease-domain-containing protein [Catenaria anguillulae PL171] diamond 207 84.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
32625774 32625774 PRJEB50332_P_NODE_9640_length_226_cov_1.890909_g9558_i0 PRJEB50332 9640 226 1.890909 4.27345434 Catenaria anguillulae PL171 765915 Fungi Fungi 55.5 7.53e-7   NR ORZ33754.1 765915 g9558 i0 58.6 4.3938053097345096 70 18 90.3 2 205 2 1 61 ORZ33754.1 40S ribosomal protein s2 [Catenaria anguillulae PL171] diamond 993 55.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;