RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB50332", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJEB50332 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28075740 28075740 PRJEB50332_P_NODE_15665_length_206_cov_0.896552_g15583_i0 PRJEB50332 15665 206 0.896552 1.84689712 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 101 2.85e-23   NR HZO88485.1 2739509 g15583 i0 73.5 0.990291262135922 68 18 99 0 3 206 123 190 HZO88485.1 hypothetical protein [Chthonomonadaceae bacterium] diamond 204 101 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
29118011 29118011 PRJEB50332_P_NODE_12749_length_211_cov_0.866667_g12667_i0 PRJEB50332 12749 211 0.866667 1.82866737 Armatimonadota bacterium 2033014 Bacteria Bacteria 45.8 8.85e-4   NR MBU0607515.1 2033014 g12667 i0 75 0.398104265402844 28 7 39.8 0 128 211 2 29 MBU0607515.1 ribonuclease HI family protein [Armatimonadota bacterium] diamond 84 45.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;