RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where bioproject = "PRJEB50332", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 11 ✖

tax_clade 1

  • Sar · 11 ✖

bioproject 1

  • PRJEB50332 · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10322377 10322377 PRJEB50332_P_NODE_18109_length_199_cov_2.028986_g18027_i0 PRJEB50332 18109 199 2.028986 4.03768214 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 104 2.08e-24   NR CDJ46527.1 51314 g18027 i0 70.3 13.6130653266332 64 19 96.5 0 194 3 341 404 CDJ46527.1 CMGC kinase, GSK family TgPK3, putative [Eimeria brunetti] diamond 2709 104 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria brunetti
11597790 11597790 PRJEB50332_P_NODE_3090_length_329_cov_1.895522_g3008_i0 PRJEB50332 3090 329 1.895522 6.23626738 Theileria orientalis 68886 SAR_Eukaryotes SAR_Eukaryotes 90.1 1.36e-19   NR UKK02333.1 68886 g3008 i0 70.7 0.52887537993921 58 17 52.9 0 24 197 149 206 UKK02333.1 60S ribosomal protein L10 [Theileria orientalis] diamond 174 90.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
14147816 14147816 PRJEB50332_P_NODE_5852_length_257_cov_0.979592_g5770_i0 PRJEB50332 5852 257 0.979592 2.51755144 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|916420781|ref|XM_013376168.1| 5802 g5770 i0 100 0.108949416342412 28 0 11 0 141 168 815 842 Eimeria tenella uncharacterized protein (ETH_00006165), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
17970981 17970981 PRJEB50332_P_NODE_15015_length_207_cov_0.890411_g14933_i0 PRJEB50332 15015 207 0.890411 1.84315077 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 125 2.47e-31   NR XP_013440163.1 51315 g14933 i0 87 13 69 9 100 0 207 1 425 493 XP_013440163.1 hypothetical protein ENH_00028530 [Eimeria necatrix] diamond 2691 125 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
17971038 17971038 PRJEB50332_P_NODE_4995_length_273_cov_1.297170_g4913_i0 PRJEB50332 4995 273 1.29717 3.5412741 Babesia ovis 5869 SAR_Eukaryotes SAR_Eukaryotes 116 6.61e-28   NR GFE55768.1 5869 g4913 i0 62.2 2.07692307692308 98 29 98.9 3 2 271 173 270 GFE55768.1 cysteine-tRNA synthetase [Babesia ovis] diamond 567 116 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis
19244984 19244984 PRJEB50332_P_NODE_14016_length_208_cov_1.768707_g13934_i0 PRJEB50332 14016 208 1.768707 3.67891056 Babesia microti strain RI 1133968 SAR_Eukaryotes SAR_Eukaryotes 69.7 7.24e-12   NR XP_021337375.1 1133968 g13934 i0 66 0.677884615384615 47 16 67.8 0 2 142 425 471 XP_021337375.1 protein transport protein SEC61 subunit alpha [Babesia microti strain RI] diamond 141 69.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia microti
28012898 28012898 PRJEB50332_P_NODE_805_length_595_cov_8.226592_g728_i0 PRJEB50332 805 595 8.226592 48.9482224 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 207 3.47e-64   NR OEH76901.1 88456 g728 i0 60.7 3.6 183 72 92.3 0 591 43 29 211 OEH76901.1 ribosomal protein rpl19 [Cyclospora cayetanensis] diamond 2142 207 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
30216259 30216259 PRJEB50332_P_NODE_6452_length_247_cov_1.290323_g6370_i0 PRJEB50332 6452 247 1.290323 3.18709781 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 50.4 7.46e-5   NR BAC57465.1 5870 g6370 i0 42.3 1.45748987854251 52 30 63.2 0 240 85 413 464 BAC57465.1 calcium-dependent protein kinase, partial [Babesia rodhaini] diamond 360 50.8 0.992125984251969 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia rodhaini
30437832 30437832 PRJEB50332_P_NODE_4213_length_290_cov_3.580786_g4131_i0 PRJEB50332 4213 290 3.580786 10.3842794 root 1 Root_unresolved Root_unresolved 89.4 5.8700000000000006e-21   NR XP_067803900.1 323732 g4131 i0 56.7 1.55172413793103 67 29 69.3 0 250 50 9 75 XP_067803900.1 bifunctional Acyl-CoA-binding protein [Babesia duncani] diamond 450 89.7 0.996655518394649 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
31796612 31796612 PRJEB50332_P_NODE_2517_length_358_cov_1.164983_g2435_i0 PRJEB50332 2517 358 1.164983 4.17063914 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 84.3 1.21e-17   NR XP_028865997.1 189622 g2435 i0 36.5 1.96927374301676 126 73 99.7 2 2 358 29 154 XP_028865997.1 translationally-controlled tumor protein [Babesia ovata] diamond 705 84.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
32783145 32783145 PRJEB50332_P_NODE_2460_length_362_cov_1.279070_g2378_i0 PRJEB50332 2460 362 1.27907 4.6302334 Porospora cf. gigantea A 2853593 SAR_Eukaryotes SAR_Eukaryotes 76.6 1.81e-14   NR XP_067806792.1 2853593 g2378 i0 45.6 1.30939226519337 79 43 65.5 0 125 361 19 97 XP_067806792.1 MAG: uncharacterized protein KVP18_001652 [Porospora cf. gigantea A] diamond 474 76.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Porosporidae Porospora Porospora cf. gigantea A

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;