RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB50332", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJEB50332 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27381381 27381381 PRJEB50332_P_NODE_14383_length_208_cov_0.884354_g14301_i0 PRJEB50332 14383 208 0.884354 1.83945632 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52 1.3e-5   NR XP_067733310.1 2049356 g14301 i0 43.5 2.09134615384615 69 31 99.5 1 207 1 63 123 XP_067733310.1 putative Calcium/calmodulin-dependent protein kinase kinase 1 [Monocercomonoides exilis] diamond 435 52 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
29615937 29615937 PRJEB50332_P_NODE_4210_length_290_cov_12.676856_g4128_i0 PRJEB50332 4210 290 12.676856 36.7628824 root 1 Root_unresolved Root_unresolved 113 1.8e-30   NR KAA6379614.1 222440 g4128 i0 58.1 3.70344827586207 93 39 96.2 0 4 282 1 93 KAA6379614.1 MAG: hypothetical protein EZS28_024857 [Streblomastix strix] diamond 1074 113 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
29685794 29685794 PRJEB50332_P_NODE_1490_length_453_cov_1.903061_g1409_i0 PRJEB50332 1490 453 1.903061 8.62086633 Streblomastix strix 222440 Preaxostyla other_Eukaryota 82 1.36e-15   NR KAA6375409.1 222440 g1409 i0 41.8 0.728476821192053 110 61 71.5 3 444 121 9 117 KAA6375409.1 MAG: putative autophagy protein 3 [Streblomastix strix] diamond 330 82 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
31645226 31645226 PRJEB50332_P_NODE_11137_length_218_cov_1.624204_g11055_i0 PRJEB50332 11137 218 1.624204 3.54076472 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 44.7 0.00386   NR KAJ4455307.1 342808 g11055 i0 28.6 1.89908256880734 70 50 96.3 0 213 4 70 139 KAJ4455307.1 putative calcyphosin protein [Paratrimastix pyriformis] diamond 414 44.7 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;