RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB50332", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJEB50332 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23071504 23071504 PRJEB50332_P_NODE_619_length_692_cov_1.768621_g549_i0 PRJEB50332 619 692 1.768621 12.23885732 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 296 8.36e-97   NR XP_013760592.1 461836 g549 i0 69.6 0.927745664739884 214 61 91.9 2 55 690 43 254 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 642 296 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28833605 28833605 PRJEB50332_P_NODE_7128_length_241_cov_1.122222_g7046_i0 PRJEB50332 7128 241 1.122222 2.70455502 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 103 4.03e-26   NR XP_013759960.1 461836 g7046 i0 66.2 1.74273858921162 74 25 92.1 0 18 239 17 90 XP_013759960.1 40S ribosomal protein S12 [Thecamonas trahens ATCC 50062] diamond 420 103 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;