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contig_metadata

12 rows where bioproject = "PRJEB49404" and tax_superkingdom = "Archaea"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Archaea · 12 ✖

tax_clade 1

bioproject 1

  • PRJEB49404 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1385112 1385112 PRJEB49404_P_NODE_500662_length_182_cov_0.769231_g486861_i0 PRJEB49404 500662 182 0.769231 1.40000042 Natrinema thermotolerans 121872 Archaea Archaea 80.5 7.1e-11   NTclustered gi|1621090060|gb|CP031304.1| 121872 g486861 i0 82.292 56.7637362637363 96 13 85 4 43 136 953230 953323 Natrinema thermotolerans strain A29 plasmid unnamed6, complete sequence blastn 10331 80.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema thermotolerans
5219383 5219383 PRJEB49404_P_NODE_630705_length_154_cov_0.991304_g616904_i0 PRJEB49404 630705 154 0.991304 1.52660816 Salarchaeum japonicum 555573 Archaea Archaea 135 1.2200000000000002e-27   NTclustered gi|2124061129|gb|CP085324.1| 555573 g616904 i0 82.692 2.93506493506493 156 23 100 4 1 154 191326 191479 Salarchaeum japonicum strain JCM 16327 chromosome, complete genome blastn 452 135 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Salarchaeum Salarchaeum japonicum
7368655 7368655 PRJEB49404_P_NODE_541406_length_172_cov_0.902256_g527605_i0 PRJEB49404 541406 172 0.902256 1.55188032 root 1 Root_unresolved Root_unresolved 313 5.989999999999998e-81   NTclustered gi|373125855|gb|JN567036.1| 29281 g527605 i0 99.419 102 172 1 100 0 1 172 538 709 Uncultured crenarchaeote clone DDOUBD11 16S ribosomal RNA gene, partial sequence blastn 17544 313 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
9028461 9028461 PRJEB49404_P_NODE_303288_length_262_cov_1.103139_g289487_i0 PRJEB49404 303288 262 1.103139 2.89022418 uncultured crenarchaeote 29281 Archaea Archaea 484 1.99e-132   NTclustered gi|22797874|emb|AJ496176.1| 29281 g289487 i0 100 48.1106870229008 262 0 100 0 1 262 7082 6821 Uncultured crenarchaeote 34 kb genomic fragment blastn 12605 484 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
21784783 21784783 PRJEB49404_P_NODE_445578_length_198_cov_0.955975_g431777_i0 PRJEB49404 445578 198 0.955975 1.8928305 uncultured crenarchaeote 29281 Archaea Archaea 344 2.53e-90   NTclustered gi|22797874|emb|AJ496176.1| 29281 g431777 i0 97.99 18.6161616161616 199 3 100 1 1 198 6405 6603 Uncultured crenarchaeote 34 kb genomic fragment blastn 3686 344 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
23067169 23067169 PRJEB49404_P_NODE_592879_length_161_cov_1.008197_g579078_i0 PRJEB49404 592879 161 1.008197 1.62319717 Natronomonas 63743 Archaea Archaea 107 3.04e-28   NR WP_015408170.1 416273 g579078 i0 86.8 1.97515527950311 53 7 98.8 0 3 161 70 122 WP_015408170.1 Rieske (2Fe-2S) protein [Natronomonas moolapensis] diamond 318 108 0.990740740740741 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas moolapensis
26653388 26653388 PRJEB49404_P_NODE_597381_length_160_cov_1.347107_g583580_i0 PRJEB49404 597381 160 1.347107 2.1553712 Halorubrum laminariae 1433523 Archaea Archaea 103 1.7599999999999998e-24   NR WP_256418948.1 1433523 g583580 i0 96.2 0.99375 53 2 99.4 0 160 2 59 111 WP_256418948.1 Cdc6/Cdc18 family protein [Halorubrum laminariae] diamond 159 103 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum laminariae
27191451 27191451 PRJEB49404_P_NODE_651702_length_150_cov_1.405405_g637901_i0 PRJEB49404 651702 150 1.405405 2.1081075 Halonotius roseus 2511997 Archaea Archaea 77.4 1.93e-16   NR WP_142444172.1 2511997 g637901 i0 90.9 1.76 44 4 88 0 18 149 1 44 WP_142444172.1 universal stress protein [Halonotius roseus] diamond 264 77.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halonotius Halonotius roseus
29300540 29300540 PRJEB49404_P_NODE_354369_length_234_cov_1.323077_g340568_i0 PRJEB49404 354369 234 1.323077 3.09600018 root 1 Root_unresolved Root_unresolved 62.8 7.1e-10   NR MDG6937951.1 2026795 g340568 i0 72.5 1.56410256410256 40 11 51.3 0 115 234 89 128 MDG6937951.1 hypothetical protein [Nitrososphaerota archaeon] diamond 366 62.8 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
29875654 29875654 PRJEB49404_P_NODE_430351_length_203_cov_1.000000_g416550_i0 PRJEB49404 430351 203 1 2.03 Halopenitus sp. H-Gu1 3242697 Archaea Archaea 120 4.4599999999999996e-32   NR WP_373674591.1 3242697 g416550 i0 83.6 0.990147783251232 67 11 99 0 201 1 117 183 WP_373674591.1 nitrous oxide reductase accessory protein NosL [Halopenitus sp. H-Gu1] diamond 201 120 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halopenitus Halopenitus sp. H-Gu1
30918372 30918372 PRJEB49404_P_NODE_627794_length_154_cov_1.426087_g613993_i0 PRJEB49404 627794 154 1.426087 2.19617398 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 55.8 2.64e-7   NR HVO78796.1 3045160 g613993 i0 59.2 1.92857142857143 49 19 95.5 1 147 1 7 54 HVO78796.1 carboxypeptidase regulatory-like domain-containing protein [Candidatus Bathyarchaeia archaeon] diamond 297 55.8 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
32720373 32720373 PRJEB49404_P_NODE_625180_length_155_cov_1.025862_g611379_i0 PRJEB49404 625180 155 1.025862 1.5900861 Natronomonas pharaonis 2257 Archaea Archaea 65.1 1.05e-10   NR WP_011323308.1 2257 g611379 i0 81.6 2.94193548387097 38 7 73.5 0 41 154 1 38 WP_011323308.1 type II methionyl aminopeptidase [Natronomonas pharaonis] diamond 456 65.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas pharaonis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;