contig_metadata
14 rows where bioproject = "PRJEB49404", tax_kingdom = "Pseudomonadati" and tax_phylum = "Nitrospirota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11594519 | 11594519 | PRJEB49404_P_NODE_615090_length_156_cov_2.410256_g601289_i0 | PRJEB49404 | 615090 | 156 | 2.410256 | 3.75999936 | Nitrospira japonica | 1325564 | Bacteria | Bacteria | 113 | 5.8100000000000006e-21 | NTclustered | gi|1167499077|emb|LT828648.1| | 1325564 | g601289 | i0 | 81.618 | 89.0320512820513 | 136 | 25 | 87 | 0 | 1 | 136 | 315954 | 316089 | Nitrospira japonica isolate Genome sequencing of Nitrospira japonica strain NJ11 genome assembly, chromosome: I | blastn | 13889 | 113 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira japonica | ||
| 16687778 | 16687778 | PRJEB49404_P_NODE_508594_length_179_cov_2.814286_g494793_i0 | PRJEB49404 | 508594 | 179 | 2.814286 | 5.03757194 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 105 | 5.0399999999999995e-25 | NR | RPH74917.1 | 2026770 | g494793 | i0 | 79.3 | 0.972067039106145 | 58 | 12 | 97.2 | 0 | 174 | 1 | 261 | 318 | RPH74917.1 MAG: glycogen debranching enzyme, partial [Nitrospiraceae bacterium] | diamond | 174 | 105 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 17962994 | 17962994 | PRJEB49404_P_NODE_515215_length_178_cov_1.215827_g501414_i0 | PRJEB49404 | 515215 | 178 | 1.215827 | 2.16417206 | Bacteria | 2 | Bacteria | Bacteria | 100 | 7.209999999999999e-23 | NR | MBS0156140.1 | 70125 | g501414 | i0 | 72.9 | 2.98314606741573 | 59 | 16 | 99.4 | 0 | 2 | 178 | 3290 | 3348 | MBS0156140.1 hypothetical protein [Nitrospira sp.] | diamond | 531 | 100 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27854780 | 27854780 | PRJEB49404_P_NODE_407445_length_211_cov_1.470930_g393644_i0 | PRJEB49404 | 407445 | 211 | 1.47093 | 3.1036623 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 77.4 | 3.91e-15 | NR | MSQ77581.1 | 2026770 | g393644 | i0 | 63.8 | 4.90521327014218 | 69 | 25 | 98.1 | 0 | 3 | 209 | 148 | 216 | MSQ77581.1 hypothetical protein [Nitrospiraceae bacterium] | diamond | 1035 | 77.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 28448206 | 28448206 | PRJEB49404_P_NODE_172506_length_391_cov_1.676136_g158713_i0 | PRJEB49404 | 172506 | 391 | 1.676136 | 6.55369176 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 70.1 | 4.96e-11 | NR | EAY56129.1 | 419542 | g158713 | i0 | 40.6 | 3.1381074168798 | 106 | 58 | 80.6 | 2 | 337 | 23 | 10 | 111 | EAY56129.1 MAG: probable IcmO protein [Leptospirillum rubarum] | diamond | 1227 | 70.5 | 0.994326241134752 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Leptospirillum | Leptospirillum rubarum | ||
| 28517958 | 28517958 | PRJEB49404_P_NODE_499647_length_182_cov_1.391608_g485846_i0 | PRJEB49404 | 499647 | 182 | 1.391608 | 2.53272656 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 41.6 | 0.0437 | NR | MBS0156140.1 | 70125 | g485846 | i0 | 41.2 | 0.840659340659341 | 51 | 28 | 84.1 | 1 | 29 | 181 | 2277 | 2325 | MBS0156140.1 hypothetical protein [Nitrospira sp.] | diamond | 153 | 41.6 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29086362 | 29086362 | PRJEB49404_P_NODE_560808_length_167_cov_1.914062_g547007_i0 | PRJEB49404 | 560808 | 167 | 1.914062 | 3.19648354 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 64.3 | 3.26e-10 | NR | MBS0156140.1 | 70125 | g547007 | i0 | 66 | 0.952095808383233 | 53 | 18 | 95.2 | 0 | 165 | 7 | 1438 | 1490 | MBS0156140.1 hypothetical protein [Nitrospira sp.] | diamond | 159 | 64.3 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29370463 | 29370463 | PRJEB49404_P_NODE_414569_length_208_cov_2.094675_g400768_i0 | PRJEB49404 | 414569 | 208 | 2.094675 | 4.356924 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 59.7 | 2.36e-8 | NR | HNP82742.1 | 70125 | g400768 | i0 | 53.4 | 1.65865384615385 | 58 | 26 | 82.2 | 1 | 176 | 6 | 3 | 60 | HNP82742.1 hypothetical protein [Nitrospira sp.] | diamond | 345 | 59.7 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29805602 | 29805602 | PRJEB49404_P_NODE_495751_length_183_cov_1.423611_g481950_i0 | PRJEB49404 | 495751 | 183 | 1.423611 | 2.60520813 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 67 | 1.5e-12 | NR | WP_213043643.1 | 1234 | g481950 | i0 | 58.2 | 3.32786885245902 | 55 | 23 | 90.2 | 0 | 19 | 183 | 1 | 55 | WP_213043643.1 MULTISPECIES: hypothetical protein [Nitrospira] | diamond | 609 | 67 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | |||
| 30507496 | 30507496 | PRJEB49404_P_NODE_489113_length_185_cov_1.123288_g475312_i0 | PRJEB49404 | 489113 | 185 | 1.123288 | 2.0780828 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 52.8 | 4.9099999999999996e-06 | NR | HET9395990.1 | 2026770 | g475312 | i0 | 81.5 | 1.31351351351351 | 27 | 5 | 43.8 | 0 | 81 | 1 | 1 | 27 | HET9395990.1 PAS domain-containing protein [Nitrospiraceae bacterium] | diamond | 243 | 52.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 31455674 | 31455674 | PRJEB49404_P_NODE_462776_length_192_cov_2.104575_g448975_i0 | PRJEB49404 | 462776 | 192 | 2.104575 | 4.040784 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 98.2 | 5.82e-22 | NR | MBS0156140.1 | 70125 | g448975 | i0 | 75.8 | 0.96875 | 62 | 15 | 96.9 | 0 | 7 | 192 | 790 | 851 | MBS0156140.1 hypothetical protein [Nitrospira sp.] | diamond | 186 | 98.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 32594508 | 32594508 | PRJEB49404_P_NODE_453120_length_195_cov_1.948718_g439319_i0 | PRJEB49404 | 453120 | 195 | 1.948718 | 3.8000001 | Candidatus Manganitrophaceae bacterium | 2932367 | Bacteria | Bacteria | 43.1 | 0.0125 | NR | TAK00757.1 | 2932367 | g439319 | i0 | 47.1 | 0.784615384615385 | 51 | 22 | 78.5 | 1 | 4 | 156 | 168 | 213 | TAK00757.1 MAG: DUF998 domain-containing protein, partial [Candidatus Manganitrophaceae bacterium] | diamond | 153 | 43.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Candidatus Troglogloeales | Candidatus Manganitrophaceae | Candidatus Manganitrophaceae bacterium | |||
| 32751805 | 32751805 | PRJEB49404_P_NODE_434600_length_201_cov_1.975309_g420799_i0 | PRJEB49404 | 434600 | 201 | 1.975309 | 3.97037109 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 87.4 | 1.15e-18 | NR | HET7058514.1 | 2026770 | g420799 | i0 | 70.8 | 0.970149253731343 | 65 | 19 | 97 | 0 | 2 | 196 | 69 | 133 | HET7058514.1 hypothetical protein [Nitrospiraceae bacterium] | diamond | 195 | 87.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 32839468 | 32839468 | PRJEB49404_P_NODE_650900_length_150_cov_1.477477_g637099_i0 | PRJEB49404 | 650900 | 150 | 1.477477 | 2.2162155 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 73.6 | 1.38e-13 | NR | MBS0156140.1 | 70125 | g637099 | i0 | 70.8 | 1.94 | 48 | 14 | 96 | 0 | 148 | 5 | 1160 | 1207 | MBS0156140.1 hypothetical protein [Nitrospira sp.] | diamond | 291 | 73.6 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;