RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB49404", tax_kingdom = "Pararnavirae" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJEB49404 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16669274 16669274 PRJEB49404_P_NODE_10954_length_2411_cov_263.969646_g388_i22 PRJEB49404 10954 2411 263.969646 6364.30816506 Gammaretrovirus murleu 3428959 Viruses Viruses 4183 0   NTclustered gi|1167936699|gb|KY574508.1| 11786 g388 i22 97.973 100.350891746163 2417 40 99 1 1 2408 2076 4492 Murine leukemia virus isolate Akv2-C25, complete genome blastn 241946 4183 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
17944069 17944069 PRJEB49404_P_NODE_10955_length_2411_cov_223.704469_g388_i23 PRJEB49404 10955 2411 223.704469 5393.51474759 Gammaretrovirus murleu 3428959 Viruses Viruses 3917 0   NTclustered gi|1167936699|gb|KY574508.1| 11786 g388 i23 95.987 100.352136043136 2417 88 99 1 4 2411 4492 2076 Murine leukemia virus isolate Akv2-C25, complete genome blastn 241949 3917 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;