RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB49404", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB49404 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9037964 9037964 PRJEB49404_P_NODE_501728_length_181_cov_2.021127_g487927_i0 PRJEB49404 501728 181 2.021127 3.65823987 Adineta vaga 104782 Rotifera other_Eukaryota 272 1.08e-68   NTclustered gi|72153731|gb|DQ089739.1| 104782 g487927 i0 93.923 95.3314917127072 181 10 100 1 1 181 219 40 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 17255 272 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
11194285 11194285 PRJEB49404_P_NODE_284789_length_274_cov_1.468085_g270988_i0 PRJEB49404 284789 274 1.468085 4.0225529 Adineta 104781 Rotifera other_Eukaryota 496 9.67e-136   NTclustered gi|1005055512|gb|KU860655.1| 1813164 g270988 i0 99.27 26.514598540146 274 2 100 0 1 274 1460 1733 Adineta vaga complex sp. A JFF-2016 isolate H001 28S ribosomal RNA gene, partial sequence blastn 7265 496 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. A JFF-2016
12860441 12860441 PRJEB49404_P_NODE_421551_length_206_cov_1.293413_g407750_i0 PRJEB49404 421551 206 1.293413 2.66443078 Adineta vaga 104782 Rotifera other_Eukaryota 359 9.47e-95   NTclustered gi|259129963|gb|GQ398061.1| 104782 g407750 i0 98.058 3.24271844660194 206 4 100 0 1 206 10178 10383 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 668 359 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
16687470 16687470 PRJEB49404_P_NODE_502334_length_181_cov_1.732394_g488533_i0 PRJEB49404 502334 181 1.732394 3.13563314 Adineta vaga complex sp. A JFF-2016 1813164 Rotifera other_Eukaryota 318 1.37e-82   NTclustered gi|1005055512|gb|KU860655.1| 1813164 g488533 i0 98.343 61.4033149171271 181 3 100 0 1 181 1888 2068 Adineta vaga complex sp. A JFF-2016 isolate H001 28S ribosomal RNA gene, partial sequence blastn 11114 318 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. A JFF-2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;