RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB49404", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJEB49404 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24320138 24320138 PRJEB49404_P_NODE_151480_length_429_cov_1.551282_g137699_i0 PRJEB49404 151480 429 1.551282 6.65499978 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 265 4.88e-66   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g137699 i0 82.943 329.606060606061 299 46 70 5 124 419 5032884 5033180 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 141401 265 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
30539022 30539022 PRJEB49404_P_NODE_498813_length_182_cov_1.706294_g485012_i0 PRJEB49404 498813 182 1.706294 3.10545508 Candidatus Baltobacteraceae bacterium 3107660 Bacteria Bacteria 71.6 1.34e-14   NR HEV3155873.1 2952909 g485012 i0 50.9 0.93956043956044 57 28 94 0 176 6 7 63 HEV3155873.1 hypothetical protein [Candidatus Baltobacteraceae bacterium] diamond 171 71.6 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium
32278295 32278295 PRJEB49404_P_NODE_302739_length_262_cov_1.726457_g288938_i0 PRJEB49404 302739 262 1.726457 4.52331734 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 44.3 0.00674   NR HYM31810.1 2952917 g288938 i0 64.9 0.423664122137405 37 13 42.4 0 223 113 1 37 HYM31810.1 hypothetical protein [Candidatus Cybelea sp.] diamond 111 44.3 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;