RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB49404", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJEB49404 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5201515 5201515 PRJEB49404_P_NODE_258845_length_293_cov_1.980315_g245044_i0 PRJEB49404 258845 293 1.980315 5.80232295 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 56.5 0.002   NTclustered gi|2874253689|emb|OY969415.1| 157466 g245044 i0 100 0.102389078498294 30 0 10 0 167 196 2217846 2217875 MAG: uncultured Armatimonadetes bacterium isolate MFD00905.bin.2.19 genome assembly, chromosome: 1 blastn 30 56.5 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
19227599 19227599 PRJEB49404_P_NODE_320396_length_251_cov_3.938679_g306595_i0 PRJEB49404 320396 251 3.938679 9.88608429 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 178 3.6e-40   NTclustered gi|2874253689|emb|OY969415.1| 157466 g306595 i0 83.085 50.4741035856574 201 28 79 6 22 219 3915008 3914811 MAG: uncultured Armatimonadetes bacterium isolate MFD00905.bin.2.19 genome assembly, chromosome: 1 blastn 12669 178 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;