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contig_metadata

22 rows where bioproject = "PRJEB49404" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 22 ✖

bioproject 1

  • PRJEB49404 · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
96341 96341 PRJEB49404_P_NODE_198061_length_354_cov_5.184127_g184262_i0 PRJEB49404 198061 354 5.184127 18.35180958 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 638 2.02e-178   NTclustered gi|698793876|ref|XR_717098.1| 112090 g184262 i0 99.153 101.635593220339 354 3 100 0 1 354 2508 2155 Aphanomyces astaci 28S ribosomal RNA rRNA blastn 35979 638 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
99984 99984 PRJEB49404_P_NODE_277081_length_279_cov_2.150000_g263280_i0 PRJEB49404 277081 279 2.15 5.9985 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 420 6.11e-113   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g263280 i0 93.885 28.0143369175627 278 17 99 0 1 278 352 629 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 7816 420 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
115680 115680 PRJEB49404_P_NODE_604281_length_158_cov_2.537815_g590480_i0 PRJEB49404 604281 158 2.537815 4.0097477 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 265 1.5399999999999998e-66   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g590480 i0 97.436 104.158227848101 156 3 98 1 4 158 3856 3701 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 16457 265 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
990916 990916 PRJEB49404_P_NODE_221621_length_327_cov_2.479167_g207822_i0 PRJEB49404 221621 327 2.479167 8.10687609 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 187 8.08e-43   NTclustered gi|2440150|emb|X75631.1| 4788 g207822 i0 89.726 44.3547400611621 146 15 45 0 180 325 3464 3319 P.megasperma gene for 28S ribosomal RNA blastn 14504 187 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megasperma
3940485 3940485 PRJEB49404_P_NODE_576484_length_164_cov_1.312000_g562683_i0 PRJEB49404 576484 164 1.312 2.15168 Schizostauron trachyderma 2770866 SAR_Eukaryotes SAR_Eukaryotes 60.2 8.18e-5   NTclustered gi|2125739626|gb|MZ520767.1| 2770866 g562683 i0 97.143 1.32317073170732 35 1 21 0 103 137 16520 16486 Schizostauron trachyderma strain SZCZE1420 mitochondrion, complete genome blastn 217 60.2 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Stauroneidaceae Schizostauron Schizostauron trachyderma
4819025 4819025 PRJEB49404_P_NODE_526324_length_175_cov_1.632353_g512523_i0 PRJEB49404 526324 175 1.632353 2.85661775 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 313 6.13e-81   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g512523 i0 98.857 14.1885714285714 175 2 100 0 1 175 1500 1674 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 2483 313 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
5204166 5204166 PRJEB49404_P_NODE_314945_length_255_cov_1.138889_g301144_i0 PRJEB49404 314945 255 1.138889 2.90416695 Chlorarachniophyceae sp. P329 467061 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.38e-4   NTclustered gi|220983374|dbj|AB453010.1| 467061 g301144 i0 100 11.5294117647059 32 0 13 0 202 233 1624 1593 Chlorarachniophyceae sp. P329 gene for nuclear large subunit ribosomal RNA, partial sequence blastn 2940 60.2 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae       Chlorarachniophyceae sp. P329
5214898 5214898 PRJEB49404_P_NODE_537145_length_172_cov_4.007519_g523344_i0 PRJEB49404 537145 172 4.007519 6.89293268 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 213 6.25e-51   NTclustered gi|813199067|ref|XR_001099866.1| 695850 g523344 i0 89.474 35.703488372093 171 14 98 4 4 172 1665 1497 Saprolegnia parasitica CBS 223.65 28S ribosomal RNA rRNA blastn 6141 213 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
6477323 6477323 PRJEB49404_P_NODE_258926_length_293_cov_1.885827_g245125_i0 PRJEB49404 258926 293 1.885827 5.52547311 Vorticella sp. 1 2979179 SAR_Eukaryotes SAR_Eukaryotes 481 2.92e-131   NTclustered gi|2304601489|gb|OP458310.1| 2979179 g245125 i0 96.259 92.4505119453925 294 10 100 1 1 293 1805 1512 Vorticella sp. 1 large subunit ribosomal RNA gene, partial sequence blastn 27088 481 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 1
10297746 10297746 PRJEB49404_P_NODE_163209_length_406_cov_5.362398_g149423_i0 PRJEB49404 163209 406 5.362398 21.77133588 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 579 1.45e-160   NTclustered gi|146762526|gb|EF553458.1| 2850 g149423 i0 92.593 100.137931034483 405 27 99 3 2 405 4085 4487 Phaeodactylum tricornutum strain CCAP 1055/1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 40656 579 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
11584858 11584858 PRJEB49404_P_NODE_415330_length_208_cov_1.633136_g401529_i0 PRJEB49404 415330 208 1.633136 3.39692288 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 279 7.68e-71   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g401529 i0 90.909 6.36538461538461 209 17 100 2 1 208 107 314 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 1324 279 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
12469938 12469938 PRJEB49404_P_NODE_207830_length_342_cov_7.396040_g194031_i0 PRJEB49404 207830 342 7.39604 25.2944568 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 627 4.22e-175   NTclustered gi|363498776|gb|JN662487.1| 120398 g194031 i0 99.708 99.8771929824561 342 1 100 0 1 342 720 379 Aphanomyces stellatus strain GF 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 34158 632 0.992088607594937 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
14144987 14144987 PRJEB49404_P_NODE_623752_length_155_cov_1.387931_g609951_i0 PRJEB49404 623752 155 1.387931 2.15129305 Naviculales sp. 2126271 SAR_Eukaryotes SAR_Eukaryotes 231 1.53e-56   NTclustered gi|2785082235|gb|PQ157946.1| 2126271 g609951 i0 93.59 102.948387096774 156 8 100 2 1 155 5668 5514 Naviculales sp. strain SZCZO2114 mitochondrion, complete genome blastn 15957 231 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales     Naviculales sp.
15409222 15409222 PRJEB49404_P_NODE_421453_length_206_cov_1.413174_g407652_i0 PRJEB49404 421453 206 1.413174 2.91113844 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 327 2.6700000000000003e-85   NTclustered gi|238617605|gb|FJ973380.1| 45107 g407652 i0 95.588 85.5922330097087 204 9 99 0 3 206 1307 1510 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 17632 327 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
16293612 16293612 PRJEB49404_P_NODE_234533_length_314_cov_2.709091_g220732_i0 PRJEB49404 234533 314 2.709091 8.50654574 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 235 2.72e-57   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g220732 i0 97.794 2.15923566878981 136 3 43 0 179 314 3082 2947 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 678 235 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
16678820 16678820 PRJEB49404_P_NODE_322094_length_251_cov_1.037736_g308293_i0 PRJEB49404 322094 251 1.037736 2.60471736 Entomoneis sp. 186043 SAR_Eukaryotes SAR_Eukaryotes 102 2.23e-17   NTclustered gi|1372147530|gb|MF997419.1| 186043 g308293 i0 75.304 0.98406374501992 247 44 96 16 1 240 21460 21224 Entomoneis sp. mitochondrion, complete genome blastn 247 102 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae   Entomoneidaceae Entomoneis Entomoneis sp.
17568944 17568944 PRJEB49404_P_NODE_559874_length_167_cov_2.398438_g546073_i0 PRJEB49404 559874 167 2.398438 4.00539146 Thalassiosirales 33847 SAR_Eukaryotes SAR_Eukaryotes 303 3.5e-78   NTclustered gi|2739942923|dbj|LC814783.1| 41457 g546073 i0 99.401 197.928143712575 167 1 100 0 1 167 4647 4481 Skeletonema pseudocostatum NIES-2843 chloroplast DNA, complete genome blastn 33054 303 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema pseudocostatum
21787081 21787081 PRJEB49404_P_NODE_493418_length_183_cov_3.236111_g479617_i0 PRJEB49404 493418 183 3.236111 5.92208313 Sellaphora blackfordensis 433383 SAR_Eukaryotes SAR_Eukaryotes 193 8.8e-45   NTclustered gi|1829658070|gb|MN319622.1| 433383 g479617 i0 89.865 67.0491803278689 148 15 81 0 1 148 285 432 Sellaphora blackfordensis voucher (Bfp04)02 28S ribosomal RNA gene, partial sequence blastn 12270 193 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Sellaphoraceae Sellaphora Sellaphora blackfordensis
21789898 21789898 PRJEB49404_P_NODE_551878_length_169_cov_1.776923_g538077_i0 PRJEB49404 551878 169 1.776923 3.00299987 Cyclidium glaucoma 35100 SAR_Eukaryotes SAR_Eukaryotes 278 2.14e-70   NTclustered gi|90657152|gb|DQ442810.1| 35100 g538077 i0 96.45 40.9230769230769 169 4 99 2 1 168 417 584 Cyclidium glaucoma isolate ES34 28S ribosomal RNA gene, partial sequence blastn 6916 278 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Cyclidiidae Cyclidium Cyclidium glaucoma
23943220 23943220 PRJEB49404_P_NODE_264179_length_289_cov_1.600000_g250378_i0 PRJEB49404 264179 289 1.6 4.624 Poterioochromonas 88166 SAR_Eukaryotes SAR_Eukaryotes 529 1.01e-145   NTclustered gi|323690576|gb|GU935635.1| 88167 g250378 i0 99.654 92.6955017301038 289 1 100 0 1 289 1443 1731 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 26789 529 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
27159668 27159668 PRJEB49404_P_NODE_594202_length_160_cov_2.363636_g580401_i0 PRJEB49404 594202 160 2.363636 3.7818176 Seminavis robusta 568900 SAR_Eukaryotes SAR_Eukaryotes 41.6 0.0321   NR CAB9497903.1 568900 g580401 i0 43.9 0.76875 41 23 76.9 0 37 159 1770 1810 CAB9497903.1 expressed unknown protein [Seminavis robusta] diamond 123 41.6 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Seminavis Seminavis robusta
28012887 28012887 PRJEB49404_P_NODE_619085_length_156_cov_1.051282_g605284_i0 PRJEB49404 619085 156 1.051282 1.63999992 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 48.9 7.48e-5   NR KAF0724015.1 100861 g605284 i0 57.6 4.55769230769231 33 14 63.5 0 101 3 993 1025 KAF0724015.1 hypothetical protein Ae201684_017215 [Aphanomyces euteiches] diamond 711 49.3 0.991886409736308 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;