RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB49404", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJEB49404 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27475915 27475915 PRJEB49404_P_NODE_41463_length_1070_cov_17.907856_g7492_i4 PRJEB49404 41463 1070 17.907856 191.6140592 Trichinella nativa 6335 Nematoda Nematoda 57 5.87e-7   NR KRZ47273.1 6335 g7492 i4 82.9 0.0981308411214953 35 6 9.8 0 285 181 9 43 KRZ47273.1 hypothetical protein T02_1459 [Trichinella nativa] diamond 105 57 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella nativa
30791779 30791779 PRJEB49404_P_NODE_159674_length_413_cov_1.831551_g145890_i0 PRJEB49404 159674 413 1.831551 7.56430563 Trichinella sp. T9 181606 Nematoda Nematoda 63.2 1.5e-10   NR KRX35621.1 181606 g145890 i0 100 0.246973365617433 34 0 24.7 0 139 240 1 34 KRX35621.1 hypothetical protein T09_1644 [Trichinella sp. T9] diamond 102 63.2 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella sp. T9

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;