RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB49404", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJEB49404 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21783378 21783378 PRJEB49404_P_NODE_416738_length_207_cov_3.113095_g402937_i0 PRJEB49404 416738 207 3.113095 6.44410665 Minisyncoccota bacterium 2053589 Bacteria Bacteria 132 3.38e-35   NR HVX91236.1 2053589 g402937 i0 91.2 3.94202898550725 68 6 98.6 0 2 205 188 255 HVX91236.1 IS3 family transposase [Candidatus Paceibacterota bacterium] diamond 816 132 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30121456 30121456 PRJEB49404_P_NODE_236652_length_312_cov_2.699634_g222851_i0 PRJEB49404 236652 312 2.699634 8.42285808 Pseudomonadati 3379134 Bacteria Bacteria 89 2.52e-18   NR HVX91236.1 2053589 g222851 i0 78.9 1.70192307692308 57 10 52.9 1 312 148 305 361 HVX91236.1 IS3 family transposase [Candidatus Paceibacterota bacterium] diamond 531 89.7 0.992196209587514 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;