RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB49404", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJEB49404 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
100319 100319 PRJEB49404_P_NODE_284161_length_274_cov_2.195745_g270360_i0 PRJEB49404 284161 274 2.195745 6.0163413 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 159 7.689999999999999e-45   NR HSR58777.1 2785449 g270360 i0 86.4 0.963503649635037 88 12 96.4 0 264 1 96 183 HSR58777.1 IS3 family transposase [Candidatus Binataceae bacterium] diamond 264 159 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
29559667 29559667 PRJEB49404_P_NODE_305910_length_260_cov_1.769231_g292109_i0 PRJEB49404 305910 260 1.769231 4.6000006 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 72 7.6e-14   NR HKN01053.1 2785449 g292109 i0 45.2 0.842307692307692 73 40 84.2 0 4 222 8 80 HKN01053.1 hypothetical protein [Candidatus Binataceae bacterium] diamond 219 72 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
31170716 31170716 PRJEB49404_P_NODE_225755_length_323_cov_1.880282_g211956_i0 PRJEB49404 225755 323 1.880282 6.07331086 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 193 5.279999999999999e-57   NR HZC21821.1 2838779 g211956 i0 83.2 7.95046439628483 107 18 99.4 0 321 1 370 476 HZC21821.1 fucose isomerase [Candidatus Binatia bacterium] diamond 2568 193 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31613730 31613730 PRJEB49404_P_NODE_617576_length_156_cov_1.401709_g603775_i0 PRJEB49404 617576 156 1.401709 2.18666604 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 69.3 4.59e-12   NR HVN84295.1 2838779 g603775 i0 66 0.961538461538462 50 17 96.2 0 3 152 343 392 HVN84295.1 OprD family outer membrane porin [Candidatus Binatia bacterium] diamond 150 69.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;