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contig_metadata

15 rows where bioproject = "PRJEB48872" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 15 ✖

bioproject 1

  • PRJEB48872 · 15 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5178446 5178446 PRJEB48872_P_NODE_389665_length_235_cov_1.882653_g373853_i0 PRJEB48872 389665 235 1.882653 4.42423455 Escherichia phage Ec_YwIITB1 3366621 Viruses Viruses 209 1.18e-49   NTclustered gi|2870405014|gb|PQ356294.1| 3366621 g373853 i0 83.043 97.8723404255319 230 39 98 0 2 231 128953 129182 Escherichia phage Ec_YwIITB1, complete genome blastn 23000 209 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Straboviridae Tequatrovirus Escherichia phage Ec_YwIITB1
6465855 6465855 PRJEB48872_P_NODE_630586_length_162_cov_1.333333_g614774_i0 PRJEB48872 630586 162 1.333333 2.15999946 Pahexavirus P101A 1982267 Viruses Viruses 294 2.03e-75   NTclustered gi|408905836|ref|NC_018841.1| 1229786 g614774 i0 99.383 98.4444444444444 162 1 100 0 1 162 25819 25980 Propionibacterium phage P101A, complete genome blastn 15948 294 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Pahexavirus Pahexavirus P101A
9017330 9017330 PRJEB48872_P_NODE_681448_length_153_cov_1.078947_g665636_i0 PRJEB48872 681448 153 1.078947 1.65078891 Prokaryotic dsDNA virus sp. 2591644 Viruses Viruses 239 8.96e-59   NTclustered gi|1707910805|gb|MK892832.1| 2591644 g665636 i0 94.771 1 153 8 100 0 1 153 86342 86494 MAG: Prokaryotic dsDNA virus sp. isolate Tp1_111_DCM_112609_1, complete genome blastn 153 239 1 Viruses               Prokaryotic dsDNA virus sp.
12826240 12826240 PRJEB48872_P_NODE_320091_length_273_cov_3.991453_g304279_i0 PRJEB48872 320091 273 3.991453 10.89666669 Orthoflavivirus denguei 3052464 Viruses Viruses 488 1.6099999999999996e-133   NTclustered gi|437772|emb|X72849.1| 11060 g304279 i0 98.901 99.8681318681319 273 3 100 0 1 273 374 102 Dengue-2 virus mRNA for premembrane and membrane proteins blastn 27264 488 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Orthoflavivirus Orthoflavivirus denguei
15018509 15018509 PRJEB48872_P_NODE_423092_length_220_cov_4.038674_g407280_i0 PRJEB48872 423092 220 4.038674 8.8850828 root 1 Root_unresolved Root_unresolved 340 3.71e-89   NTclustered gi|2461903820|gb|OQ652965.1| 11060 g407280 i0 100 83.5090909090909 184 0 84 0 37 220 1080 897 Dengue virus type 2 isolate DENV2_YN_017, complete genome blastn 18372 340 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Orthoflavivirus Orthoflavivirus denguei
16293489 16293489 PRJEB48872_P_NODE_612873_length_166_cov_0.897638_g597061_i0 PRJEB48872 612873 166 0.897638 1.49007908 Pahexavirus 1982251 Viruses Viruses 257 2.7400000000000003e-64   NTclustered gi|408905836|ref|NC_018841.1| 1229786 g597061 i0 94.578 98.3132530120482 166 9 100 0 1 166 10609 10774 Propionibacterium phage P101A, complete genome blastn 16320 257 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Pahexavirus Pahexavirus P101A
17938502 17938502 PRJEB48872_P_NODE_614155_length_165_cov_1.952381_g598343_i0 PRJEB48872 614155 165 1.952381 3.22142865 Mimiviridae sp. ChoanoV1 2596887 Viruses Viruses 52.8 0.014   NTclustered gi|1717455947|gb|MK250087.1| 2596887 g598343 i0 100 0.16969696969697 28 0 17 0 43 70 7801 7774 Mimiviridae sp. ChoanoV1 genomic sequence blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Schizomimiviridae   Mimiviridae sp. ChoanoV1
18842477 18842477 PRJEB48872_P_NODE_697875_length_150_cov_1.315315_g682063_i0 PRJEB48872 697875 150 1.315315 1.9729725 Pahexavirus 1982251 Viruses Viruses 259 6.71e-65   NTclustered gi|408905834|ref|NC_018839.1| 1229784 g682063 i0 98.63 94.1 146 2 97 0 5 150 7992 7847 Propionibacterium phage P14.4, complete genome blastn 14115 261 0.992337164750958 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Pahexavirus Pahexavirus P144
20117168 20117168 PRJEB48872_P_NODE_346196_length_257_cov_4.243119_g330384_i0 PRJEB48872 346196 257 4.243119 10.90481583 root 1 Root_unresolved Root_unresolved 464 2.5299999999999998e-126   NTclustered gi|259496212|gb|GQ868591.1| 11060 g330384 i0 99.222 100.603112840467 257 2 100 0 1 257 529 273 Dengue virus 2 isolate DENV-2/TH/BID-V3357/1964, complete genome blastn 25855 464 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Orthoflavivirus Orthoflavivirus denguei
20117179 20117179 PRJEB48872_P_NODE_362476_length_248_cov_3.971292_g346664_i0 PRJEB48872 362476 248 3.971292 9.84880416 root 1 Root_unresolved Root_unresolved 453 5.2600000000000005e-123   NTclustered gi|224383579|gb|FJ687445.1| 11060 g346664 i0 99.597 100 248 1 100 0 1 248 265 18 Dengue virus 2 isolate DENV-2/TH/BID-V2290/2001, complete genome blastn 24800 453 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Orthoflavivirus Orthoflavivirus denguei
20117263 20117263 PRJEB48872_P_NODE_538716_length_183_cov_1.388889_g522904_i0 PRJEB48872 538716 183 1.388889 2.54166687 Pahexavirus 1982251 Viruses Viruses 305 1.08e-78   NTclustered gi|1631925795|ref|NC_041954.1| 1655013 g522904 i0 96.721 100.453551912568 183 6 100 0 1 183 20677 20859 Propionibacterium phage Keiki, complete genome blastn 18383 305 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Pahexavirus Pahexavirus keiki
22667616 22667616 PRJEB48872_P_NODE_492558_length_196_cov_1.458599_g476746_i0 PRJEB48872 492558 196 1.458599 2.85885404 Pahexavirus 1982251 Viruses Viruses 357 3.2099999999999996e-94   NTclustered gi|945393407|gb|KT934381.1| 1747271 g476746 i0 99.49 98.1632653061225 196 1 100 0 1 196 21157 20962 Propionibacterium phage PA1-14, complete genome blastn 19240 357 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Pahexavirus Propionibacterium phage PA1-14
28454904 28454904 PRJEB48872_P_NODE_672226_length_154_cov_1.965217_g656414_i0 PRJEB48872 672226 154 1.965217 3.02643418 Mitoviridae sp. 2809572 Viruses Viruses 54.3 9.25e-7   NR WAK72431.1 2809572 g656414 i0 60 2.35714285714286 40 16 77.9 0 121 2 200 239 WAK72431.1 MAG: RNA-dependent RNA polymerase, partial [Mitoviridae sp.] diamond 363 54.3 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Mitoviridae sp.
32088240 32088240 PRJEB48872_P_NODE_589098_length_171_cov_1.174242_g573286_i0 PRJEB48872 589098 171 1.174242 2.00795382 Betapolyomavirus macacae 1891767 Viruses Viruses 52.8 4.19e-6   NR AAK29054.1 1891767 g573286 i0 72.2 0.631578947368421 36 10 63.2 0 108 1 494 529 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 108 52.8 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
32436604 32436604 PRJEB48872_P_NODE_543559_length_181_cov_21.380282_g527747_i0 PRJEB48872 543559 181 21.380282 38.69831042 Pimephales minnow adintovirus 2609864 Viruses Viruses 58.2 3.33e-8   NR DAC81394.1 2609864 g527747 i0 69.4 0.596685082872928 36 11 59.7 0 72 179 7 42 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 108 58.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;