RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB48872" and tax_phylum = "Thermotogota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermotogota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB48872 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14110456 14110456 PRJEB48872_P_NODE_515112_length_189_cov_2.033333_g499300_i0 PRJEB48872 515112 189 2.033333 3.84299937 Kosmotoga pacifica 1330330 Bacteria Bacteria 161 2.5799999999999996e-35   NTclustered gi|827411924|gb|CP011232.1| 1330330 g499300 i0 86.486 80.5820105820106 148 18 77 2 43 188 537494 537641 Kosmotoga pacifica strain SLHLJ1, complete genome blastn 15230 161 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Kosmotoga Kosmotoga pacifica
29244117 29244117 PRJEB48872_P_NODE_290169_length_294_cov_6.290196_g274357_i0 PRJEB48872 290169 294 6.290196 18.49317624 Thermotogota bacterium 2053689 Bacteria Bacteria 43.1 0.0159   NR MDY6895075.1 2053689 g274357 i0 38.9 0.73469387755102 72 31 73.5 4 26 241 24 82 MDY6895075.1 ADP-ribosylglycohydrolase family protein [Thermotogota bacterium] diamond 216 43.1 1 Bacteria   Thermotogati Thermotogota         Thermotogota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;