contig_metadata
9 rows where bioproject = "PRJEB48872" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12844426 | 12844426 | PRJEB48872_P_NODE_698111_length_150_cov_1.135135_g682299_i0 | PRJEB48872 | 698111 | 150 | 1.135135 | 1.7027025 | Desulfohalobiaceae bacterium | 2683721 | Bacteria | Bacteria | 97.1 | 5.65e-22 | NR | MCF8085469.1 | 2683721 | g682299 | i0 | 94 | 2 | 50 | 3 | 100 | 0 | 150 | 1 | 106 | 155 | MCF8085469.1 FAD-binding protein [Desulfohalobiaceae bacterium] | diamond | 300 | 97.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfohalobiaceae | Desulfohalobiaceae bacterium | |||
| 16293478 | 16293478 | PRJEB48872_P_NODE_594493_length_169_cov_2.892308_g578681_i0 | PRJEB48872 | 594493 | 169 | 2.892308 | 4.88800052 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 156 | 1.05e-33 | NTclustered | gi|2105309617|dbj|AP024485.1| | 2810563 | g578681 | i0 | 83.636 | 51.1420118343195 | 165 | 27 | 98 | 0 | 4 | 168 | 3531743 | 3531579 | Pseudodesulfovibrio sediminis SF6 DNA, complete genome | blastn | 8643 | 156 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Pseudodesulfovibrio | Pseudodesulfovibrio sediminis | ||
| 22667730 | 22667730 | PRJEB48872_P_NODE_688778_length_151_cov_2.196429_g672966_i0 | PRJEB48872 | 688778 | 151 | 2.196429 | 3.31660779 | Desulfurivibrio | 427922 | Bacteria | Bacteria | 141 | 2.56e-29 | NTclustered | gi|470485970|ref|NR_076727.1| | 427923 | g672966 | i0 | 84 | 158.139072847682 | 150 | 21 | 99 | 3 | 1 | 149 | 327 | 474 | Desulfurivibrio alkaliphilus strain AHT 2 23S ribosomal RNA gene, complete sequence | blastn | 23879 | 141 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfurivibrio | Desulfurivibrio alkaliphilus | ||
| 26590026 | 26590026 | PRJEB48872_P_NODE_648781_length_159_cov_0.933333_g632969_i0 | PRJEB48872 | 648781 | 159 | 0.933333 | 1.48399947 | uncultured Desulfovibrio sp. | 167968 | Bacteria | Bacteria | 41.2 | 0.042 | NR | WP_300772992.1 | 167968 | g632969 | i0 | 40.9 | 0.830188679245283 | 44 | 26 | 83 | 0 | 21 | 152 | 1250 | 1293 | WP_300772992.1 acyl-CoA dehydratase activase-related protein [uncultured Desulfovibrio sp.] | diamond | 132 | 41.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | uncultured Desulfovibrio sp. | ||
| 29268737 | 29268737 | PRJEB48872_P_NODE_281229_length_302_cov_1.247148_g265417_i0 | PRJEB48872 | 281229 | 302 | 1.247148 | 3.76638696 | Thermodesulfobacteriota | 200940 | Bacteria | Bacteria | 43.1 | 0.05 | NR | MDD7476222.1 | 885 | g265417 | i0 | 34.7 | 1.22185430463576 | 72 | 44 | 71.5 | 1 | 87 | 302 | 187 | 255 | MDD7476222.1 DotH/IcmK family type IV secretion protein [Desulfovibrio sp.] | diamond | 369 | 43.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio sp. | ||
| 29496658 | 29496658 | PRJEB48872_P_NODE_694150_length_150_cov_2.801802_g678338_i0 | PRJEB48872 | 694150 | 150 | 2.801802 | 4.202703 | Smithella sp. | 2053614 | Bacteria | Bacteria | 49.3 | 3.58e-5 | NR | MEN6623685.1 | 2053614 | g678338 | i0 | 46.9 | 0.98 | 49 | 23 | 98 | 1 | 3 | 149 | 109 | 154 | MEN6623685.1 N-6 DNA methylase [Smithella sp.] | diamond | 147 | 49.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Smithellaceae | Smithella | Smithella sp. | ||
| 29591000 | 29591000 | PRJEB48872_P_NODE_575990_length_174_cov_1.155556_g560178_i0 | PRJEB48872 | 575990 | 174 | 1.155556 | 2.01066744 | Syntrophotalea acetylenica | 29542 | Bacteria | Bacteria | 72.8 | 3.5e-13 | NR | MDD4456268.1 | 29542 | g560178 | i0 | 50.9 | 0.982758620689655 | 57 | 28 | 98.3 | 0 | 2 | 172 | 30 | 86 | MDD4456268.1 YqaJ viral recombinase family protein [Syntrophotalea acetylenica] | diamond | 171 | 72.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Syntrophotaleaceae | Syntrophotalea | Syntrophotalea acetylenica | ||
| 30311683 | 30311683 | PRJEB48872_P_NODE_541112_length_182_cov_1.874126_g525300_i0 | PRJEB48872 | 541112 | 182 | 1.874126 | 3.41090932 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 79 | 1.85e-16 | NR | WP_008869731.1 | 488939 | g525300 | i0 | 58.3 | 4.74725274725275 | 60 | 25 | 98.9 | 0 | 2 | 181 | 56 | 115 | WP_008869731.1 hypothetical protein [Desulfonatronospira thiodismutans] | diamond | 864 | 79.7 | 0.991217063989962 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfonatronovibrionaceae | Desulfonatronospira | Desulfonatronospira thiodismutans | ||
| 31803361 | 31803361 | PRJEB48872_P_NODE_622277_length_164_cov_0.984000_g606465_i0 | PRJEB48872 | 622277 | 164 | 0.984 | 1.61376 | Desulfovibrio piger | 901 | Bacteria | Bacteria | 40 | 0.0226 | NR | WP_072335524.1 | 901 | g606465 | i0 | 46.7 | 0.823170731707317 | 45 | 20 | 75 | 1 | 6 | 128 | 27 | 71 | WP_072335524.1 helix-turn-helix domain-containing protein [Desulfovibrio piger] | diamond | 135 | 40 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio piger |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;