RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB48872" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB48872 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9919001 9919001 PRJEB48872_P_NODE_606968_length_167_cov_1.281250_g591156_i0 PRJEB48872 606968 167 1.28125 2.1396875 Armatimonadota 67819 Bacteria Bacteria 111 2.28e-20   NTclustered gi|1996217993|dbj|AP021858.1| 2608984 g591156 i0 84.685 5.05389221556886 111 17 66 0 1 111 35646 35756 Candidatus Nitrosymbiomonas proteolyticus DNA, complete genome blastn 844 111 1 Bacteria   Bacillati Armatimonadota       Candidatus Nitrosymbiomonas Candidatus Nitrosymbiomonas proteolyticus
20117288 20117288 PRJEB48872_P_NODE_586836_length_171_cov_1.848485_g571024_i0 PRJEB48872 586836 171 1.848485 3.16090935 Fimbriimonas 1005038 Bacteria Bacteria 254 3.66e-63   NTclustered gi|663071213|gb|CP007139.1| 661478 g571024 i0 94.012 176.157894736842 167 10 98 0 5 171 28473 28307 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 30123 254 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
28833572 28833572 PRJEB48872_P_NODE_592208_length_170_cov_1.557252_g576396_i0 PRJEB48872 592208 170 1.557252 2.6473284 Chthonomonadales bacterium 2282151 Bacteria Bacteria 86.7 6.51e-19   NR HEV2471409.1 2282151 g576396 i0 75 0.917647058823529 52 13 91.8 0 170 15 196 247 HEV2471409.1 tetratricopeptide repeat protein [Chthonomonadales bacterium] diamond 156 86.7 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;