RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB48872" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJEB48872 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26709914 26709914 PRJEB48872_P_NODE_332261_length_266_cov_1.533040_g316449_i0 PRJEB48872 332261 266 1.53304 4.0778864 root 1 Root_unresolved Root_unresolved 92.4 1.5700000000000001e-19   NR WP_096204780.1 1392998 g316449 i0 48.3 2.76315789473684 87 45 98.1 0 264 4 431 517 WP_096204780.1 PAS domain S-box protein [Candidatus Methanoperedens nitroreducens] diamond 735 92.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens nitratireducens
31202083 31202083 PRJEB48872_P_NODE_632715_length_162_cov_1.000000_g616903_i0 PRJEB48872 632715 162 1 1.62 Salinarchaeum sp. IM2453 2862870 Archaea Archaea 88.2 3.87e-20   NR WP_221171259.1 2862870 g616903 i0 81.5 1 54 10 100 0 162 1 52 105 WP_221171259.1 TATA-box-binding protein [Salinarchaeum sp. IM2453] diamond 162 88.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronoarchaeaceae Salinarchaeum Salinarchaeum sp. IM2453

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;