contig_metadata
26 rows where bioproject = "PRJEB48872" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1365587 | 1365587 | PRJEB48872_P_NODE_76762_length_783_cov_2.345430_g62671_i0 | PRJEB48872 | 76762 | 783 | 2.34543 | 18.3647169 | Humisphaera borealis | 2807512 | Bacteria | Bacteria | 965 | 0 | NTclustered | gi|1927742986|gb|CP063458.1| | 2807512 | g62671 | i0 | 89.059 | 127.501915708812 | 786 | 75 | 99 | 11 | 1 | 782 | 5063786 | 5063008 | Humisphaera borealis strain M1803 chromosome, complete genome | blastn | 99834 | 965 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis | |
| 2631413 | 2631413 | PRJEB48872_P_NODE_503903_length_192_cov_3.111111_g488091_i0 | PRJEB48872 | 503903 | 192 | 3.111111 | 5.97333312 | Humisphaera borealis | 2807512 | Bacteria | Bacteria | 268 | 1.5099999999999998e-67 | NTclustered | gi|1927742986|gb|CP063458.1| | 2807512 | g488091 | i0 | 96.894 | 108.713541666667 | 161 | 3 | 84 | 2 | 32 | 192 | 5064245 | 5064403 | Humisphaera borealis strain M1803 chromosome, complete genome | blastn | 20873 | 268 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis | |
| 2638362 | 2638362 | PRJEB48872_P_NODE_646123_length_159_cov_1.425000_g630311_i0 | PRJEB48872 | 646123 | 159 | 1.425 | 2.26575 | Aquisphaera giovannonii | 406548 | Bacteria | Bacteria | 254 | 3.36e-63 | NTclustered | gi|1730068067|gb|CP042997.1| | 406548 | g630311 | i0 | 95.597 | 77.937106918239 | 159 | 5 | 99 | 2 | 2 | 159 | 5178964 | 5179121 | Aquisphaera giovannonii strain OJF2 chromosome, complete genome | blastn | 12392 | 254 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Aquisphaera | Aquisphaera giovannonii | |
| 15018576 | 15018576 | PRJEB48872_P_NODE_564972_length_176_cov_1.854015_g549160_i0 | PRJEB48872 | 564972 | 176 | 1.854015 | 3.2630664 | Gemmataceae | 1914233 | Bacteria | Bacteria | 265 | 1.7499999999999998e-66 | NTclustered | gi|1804905141|emb|LR593886.1| | 1210884 | g549160 | i0 | 93.785 | 69.5227272727273 | 177 | 9 | 100 | 2 | 1 | 176 | 3634047 | 3634222 | Gemmata massiliana isolate Soil9 genome assembly, chromosome: 1 | blastn | 12236 | 265 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata massiliana | |
| 19214762 | 19214762 | PRJEB48872_P_NODE_663756_length_156_cov_1.247863_g647944_i0 | PRJEB48872 | 663756 | 156 | 1.247863 | 1.94666628 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 268 | 1.1699999999999997e-67 | NTclustered | gi|2874254106|emb|OY970189.1| | 100233 | g647944 | i0 | 98.052 | 279.192307692308 | 154 | 3 | 99 | 0 | 2 | 155 | 4319681 | 4319834 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 | blastn | 43554 | 268 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 23036313 | 23036313 | PRJEB48872_P_NODE_560999_length_177_cov_1.782609_g545187_i0 | PRJEB48872 | 560999 | 177 | 1.782609 | 3.15521793 | Humisphaera borealis | 2807512 | Bacteria | Bacteria | 145 | 2.4e-30 | NTclustered | gi|1927742986|gb|CP063458.1| | 2807512 | g545187 | i0 | 86.364 | 8.05084745762712 | 132 | 18 | 75 | 0 | 1 | 132 | 5064014 | 5063883 | Humisphaera borealis strain M1803 chromosome, complete genome | blastn | 1425 | 145 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis | |
| 23943056 | 23943056 | PRJEB48872_P_NODE_548719_length_180_cov_2.000000_g532907_i0 | PRJEB48872 | 548719 | 180 | 2 | 3.6 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 250 | 5.04e-62 | NTclustered | gi|2874254020|emb|OY970345.1| | 412056 | g532907 | i0 | 91.713 | 18.9833333333333 | 181 | 14 | 100 | 1 | 1 | 180 | 3894162 | 3893982 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04212.bin.2.122 genome assembly, chromosome: 1 | blastn | 3417 | 250 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 26716573 | 26716573 | PRJEB48872_P_NODE_659501_length_157_cov_0.949153_g643689_i0 | PRJEB48872 | 659501 | 157 | 0.949153 | 1.49017021 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 70.9 | 1.12e-12 | NR | NUQ67316.1 | 2052180 | g643689 | i0 | 65.3 | 1.91082802547771 | 49 | 17 | 93.6 | 0 | 3 | 149 | 281 | 329 | NUQ67316.1 aldo/keto reductase [Phycisphaerales bacterium] | diamond | 300 | 70.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 26805192 | 26805192 | PRJEB48872_P_NODE_607401_length_167_cov_1.078125_g591589_i0 | PRJEB48872 | 607401 | 167 | 1.078125 | 1.80046875 | Bacteria | 2 | Bacteria | Bacteria | 59.7 | 1.38e-8 | NR | MBV9643843.1 | 2026799 | g591589 | i0 | 54.5 | 4.94011976047904 | 55 | 24 | 98.8 | 1 | 165 | 1 | 364 | 417 | MBV9643843.1 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [Verrucomicrobiota bacterium] | diamond | 825 | 60.1 | 0.993344425956739 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27222961 | 27222961 | PRJEB48872_P_NODE_266883_length_314_cov_1.461818_g251071_i0 | PRJEB48872 | 266883 | 314 | 1.461818 | 4.59010852 | Candidatus Brocadiales bacterium | 2760054 | Bacteria | Bacteria | 42.7 | 0.0398 | NR | MEE9200699.1 | 2760054 | g251071 | i0 | 63.6 | 0.210191082802548 | 22 | 8 | 21 | 0 | 156 | 91 | 28 | 49 | MEE9200699.1 cytochrome C [Candidatus Brocadiales bacterium] | diamond | 66 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Brocadiia | Candidatus Brocadiales | Candidatus Brocadiales bacterium | |||
| 27633895 | 27633895 | PRJEB48872_P_NODE_485484_length_198_cov_1.767296_g469672_i0 | PRJEB48872 | 485484 | 198 | 1.767296 | 3.49924608 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 78.6 | 4.76e-15 | NR | HSZ79764.1 | 2201154 | g469672 | i0 | 54.5 | 1.98484848484848 | 66 | 29 | 98.5 | 1 | 2 | 196 | 22 | 87 | HSZ79764.1 ATP-binding protein [Chthoniobacterales bacterium] | diamond | 393 | 78.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 27753590 | 27753590 | PRJEB48872_P_NODE_695044_length_150_cov_2.018018_g679232_i0 | PRJEB48872 | 695044 | 150 | 2.018018 | 3.027027 | PVC group | 1783257 | Bacteria | Bacteria | 73.2 | 1.89e-13 | NR | MDG6026916.1 | 2172549 | g679232 | i0 | 65.3 | 7.8 | 49 | 17 | 98 | 0 | 148 | 2 | 1204 | 1252 | MDG6026916.1 hypothetical protein [Candidatus Brocadia sp.] | diamond | 1170 | 73.6 | 0.994565217391304 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Brocadiia | Candidatus Brocadiales | Candidatus Brocadiaceae | Candidatus Brocadia | Candidatus Brocadia sp. | |
| 28201905 | 28201905 | PRJEB48872_P_NODE_476786_length_201_cov_1.456790_g460974_i0 | PRJEB48872 | 476786 | 201 | 1.45679 | 2.9281479 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 82 | 3.09e-16 | NR | HZO86111.1 | 2499141 | g460974 | i0 | 71.2 | 3.94029850746269 | 66 | 19 | 98.5 | 0 | 4 | 201 | 462 | 527 | HZO86111.1 TolC family protein [Verrucomicrobiia bacterium] | diamond | 792 | 82 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 28675849 | 28675849 | PRJEB48872_P_NODE_380987_length_239_cov_2.090000_g365175_i0 | PRJEB48872 | 380987 | 239 | 2.09 | 4.9951 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 110 | 1.14e-28 | NR | MBU0718477.1 | 2026780 | g365175 | i0 | 61.5 | 0.97907949790795 | 78 | 30 | 97.9 | 0 | 3 | 236 | 5 | 82 | MBU0718477.1 toll/interleukin-1 receptor domain-containing protein [Planctomycetota bacterium] | diamond | 234 | 110 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28738907 | 28738907 | PRJEB48872_P_NODE_443827_length_212_cov_2.300578_g428015_i0 | PRJEB48872 | 443827 | 212 | 2.300578 | 4.87722536 | Pirellulales bacterium | 2715253 | Bacteria | Bacteria | 53.9 | 2.9e-6 | NR | MDB4475171.1 | 2715253 | g428015 | i0 | 41.4 | 1.74056603773585 | 58 | 29 | 82.1 | 1 | 194 | 21 | 2518 | 2570 | MDB4475171.1 Ig-like domain-containing protein [Pirellulales bacterium] | diamond | 369 | 53.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulales bacterium | |||
| 29590996 | 29590996 | PRJEB48872_P_NODE_349230_length_256_cov_1.502304_g333418_i0 | PRJEB48872 | 349230 | 256 | 1.502304 | 3.84589824 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 79.7 | 3.31e-16 | NR | MCU0778424.1 | 2562705 | g333418 | i0 | 60.5 | 2.0625 | 86 | 33 | 99.6 | 1 | 2 | 256 | 85 | 170 | MCU0778424.1 hypothetical protein [Akkermansiaceae bacterium] | diamond | 528 | 79.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 29907279 | 29907279 | PRJEB48872_P_NODE_610751_length_166_cov_1.425197_g594939_i0 | PRJEB48872 | 610751 | 166 | 1.425197 | 2.36582702 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 94.7 | 6.4400000000000006e-21 | NR | HSZ78553.1 | 2201154 | g594939 | i0 | 72.7 | 0.993975903614458 | 55 | 15 | 99.4 | 0 | 166 | 2 | 14 | 68 | HSZ78553.1 two-component regulator propeller domain-containing protein [Chthoniobacterales bacterium] | diamond | 165 | 94.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 30350030 | 30350030 | PRJEB48872_P_NODE_692192_length_151_cov_1.250000_g676380_i0 | PRJEB48872 | 692192 | 151 | 1.25 | 1.8875 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 107 | 8.39e-26 | NR | MBM3971287.1 | 2026780 | g676380 | i0 | 100 | 2.98013245033113 | 50 | 0 | 99.3 | 0 | 2 | 151 | 168 | 217 | MBM3971287.1 hypothetical protein [Planctomycetota bacterium] | diamond | 450 | 107 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 30595367 | 30595367 | PRJEB48872_P_NODE_284713_length_299_cov_1.719231_g268901_i0 | PRJEB48872 | 284713 | 299 | 1.719231 | 5.14050069 | Bacteria | 2 | Bacteria | Bacteria | 119 | 7.639999999999999e-31 | NR | HEX9785044.1 | 2006848 | g268901 | i0 | 71.8 | 3.91304347826087 | 78 | 21 | 78.3 | 1 | 1 | 234 | 188 | 264 | HEX9785044.1 DUF1080 domain-containing protein [Opitutaceae bacterium] | diamond | 1170 | 119 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 30791769 | 30791769 | PRJEB48872_P_NODE_393594_length_233_cov_2.288660_g377782_i0 | PRJEB48872 | 393594 | 233 | 2.28866 | 5.3325778 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 145 | 2.56e-39 | NR | MCX6930206.1 | 2026799 | g377782 | i0 | 90.9 | 1.98283261802575 | 77 | 7 | 99.1 | 0 | 231 | 1 | 87 | 163 | MCX6930206.1 oleate hydratase [Verrucomicrobiota bacterium] | diamond | 462 | 145 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31163941 | 31163941 | PRJEB48872_P_NODE_696215_length_150_cov_1.477477_g680403_i0 | PRJEB48872 | 696215 | 150 | 1.477477 | 2.2162155 | Bacteria | 2 | Bacteria | Bacteria | 94 | 9.21e-21 | NR | HEV3099096.1 | 2665650 | g680403 | i0 | 93.9 | 9.8 | 49 | 3 | 98 | 0 | 3 | 149 | 109 | 157 | HEV3099096.1 CusA/CzcA family heavy metal efflux RND transporter [Candidatus Udaeobacter sp.] | diamond | 1470 | 94 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Candidatus Udaeobacter | Candidatus Udaeobacter sp. | |
| 31582234 | 31582234 | PRJEB48872_P_NODE_459056_length_207_cov_1.392857_g443244_i0 | PRJEB48872 | 459056 | 207 | 1.392857 | 2.88321399 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 86.7 | 1.88e-18 | NR | HEY0789742.1 | 2201154 | g443244 | i0 | 58.8 | 3.94202898550725 | 68 | 28 | 98.6 | 0 | 206 | 3 | 218 | 285 | HEY0789742.1 transketolase [Chthoniobacterales bacterium] | diamond | 816 | 86.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 32018264 | 32018264 | PRJEB48872_P_NODE_689398_length_151_cov_1.866071_g673586_i0 | PRJEB48872 | 689398 | 151 | 1.866071 | 2.81776721 | Bacteria | 2 | Bacteria | Bacteria | 97.1 | 7.89e-22 | NR | MBV9674166.1 | 2026799 | g673586 | i0 | 92 | 20.8609271523179 | 50 | 4 | 99.3 | 0 | 150 | 1 | 133 | 182 | MBV9674166.1 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [Verrucomicrobiota bacterium] | diamond | 3150 | 97.4 | 0.996919917864476 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32088235 | 32088235 | PRJEB48872_P_NODE_508698_length_191_cov_1.703947_g492886_i0 | PRJEB48872 | 508698 | 191 | 1.703947 | 3.25453877 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 42 | 0.0357 | NR | MDP6637106.1 | 2026778 | g492886 | i0 | 38.8 | 0.769633507853403 | 49 | 30 | 77 | 0 | 154 | 8 | 447 | 495 | MDP6637106.1 DUF3604 domain-containing protein [Phycisphaerae bacterium] | diamond | 147 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 32404753 | 32404753 | PRJEB48872_P_NODE_668839_length_155_cov_1.413793_g653027_i0 | PRJEB48872 | 668839 | 155 | 1.413793 | 2.19137915 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 84.7 | 6.34e-18 | NR | MBV8312565.1 | 2026779 | g653027 | i0 | 78.4 | 0.987096774193548 | 51 | 11 | 98.7 | 0 | 153 | 1 | 139 | 189 | MBV8312565.1 TolC family protein [Planctomycetaceae bacterium] | diamond | 153 | 84.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 32783115 | 32783115 | PRJEB48872_P_NODE_664760_length_156_cov_1.051282_g648948_i0 | PRJEB48872 | 664760 | 156 | 1.051282 | 1.63999992 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 68.6 | 7.69e-12 | NR | MFA7174771.1 | 2212473 | g648948 | i0 | 63.3 | 0.942307692307692 | 49 | 18 | 94.2 | 0 | 2 | 148 | 193 | 241 | MFA7174771.1 hypothetical protein [Kiritimatiellia bacterium] | diamond | 147 | 68.6 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;