RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJEB48218" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 5 ✖

bioproject 1

  • PRJEB48218 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15365065 15365065 PRJEB48218_S_NODE_8313_length_326_cov_4.764310_g7351_i0 PRJEB48218 8313 326 4.76431 15.5316506 Orthopoxvirus 10242 Viruses Viruses 189 1.23e-58   NR ATB55171.1 10243 g7351 i0 100 21.3957055214724 93 0 85.6 0 281 3 1 93 ATB55171.1 CPXV129 protein [Cowpox virus] diamond 6975 189 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus cowpox
23942770 23942770 PRJEB48218_S_NODE_4399_length_551_cov_9.268199_g3477_i0 PRJEB48218 4399 551 9.268199 51.06777649 Orthopoxvirus 10242 Viruses Viruses 366 4.269999999999998e-119   NR WBA78916.1 10244 g3477 i0 100 10.9491833030853 183 0 99.6 0 550 2 573 755 WBA78916.1 mRNA capping enzyme large subunit [Monkeypox virus] diamond 6033 366 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
29496645 29496645 PRJEB48218_S_NODE_27630_length_161_cov_5.356061_g26668_i0 PRJEB48218 27630 161 5.356061 8.62325821 Ectromelia virus 12643 Viruses Viruses 103 4.58e-25   NR NP_671619.1 12643 g26668 i0 96.2 0.987577639751553 53 2 98.8 0 160 2 190 242 NP_671619.1 EVM101 [Ectromelia virus] diamond 159 103 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus ectromelia
29590995 29590995 PRJEB48218_S_NODE_7790_length_342_cov_6.076677_g6828_i0 PRJEB48218 7790 342 6.076677 20.78223534 Camelpox virus 28873 Viruses Viruses 219 2.9300000000000003e-64   NR NP_570494.1 28873 g6828 i0 96.5 7.99122807017544 113 4 99.1 0 1 339 470 582 NP_570494.1 CMLV104 [Camelpox virus] diamond 2733 219 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus camelpox
32398077 32398077 PRJEB48218_S_NODE_8799_length_313_cov_3.799296_g7837_i0 PRJEB48218 8799 313 3.799296 11.89179648 Orthopoxvirus 10242 Viruses Viruses 208 5.08e-66   NR ATB55171.1 10243 g7837 i0 100 11.8370607028754 103 0 98.7 0 3 311 95 197 ATB55171.1 CPXV129 protein [Cowpox virus] diamond 3705 208 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus cowpox

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;