RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB48218", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJEB48218 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6093520 6093520 PRJEB48218_S_NODE_27545_length_162_cov_2.015038_g26583_i0 PRJEB48218 27545 162 2.015038 3.26436156 Fimbriimonas 1005038 Bacteria Bacteria 148 1.6699999999999999e-31   NTclustered gi|663071213|gb|CP007139.1| 661478 g26583 i0 84.516 4.58024691358025 155 18 94 6 11 162 29028 29179 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 742 148 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
21392348 21392348 PRJEB48218_S_NODE_17237_length_226_cov_1417.436548_g16275_i0 PRJEB48218 17237 226 1417.436548 3203.40659848 Armatimonadota 67819 Bacteria Bacteria 176 1.14e-39   NTclustered gi|1996217993|dbj|AP021858.1| 2608984 g16275 i0 91.406 349.544247787611 128 11 57 0 97 224 35599 35726 Candidatus Nitrosymbiomonas proteolyticus DNA, complete genome blastn 78997 176 1 Bacteria   Bacillati Armatimonadota       Candidatus Nitrosymbiomonas Candidatus Nitrosymbiomonas proteolyticus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;