RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB48218", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJEB48218 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23014355 23014355 PRJEB48218_S_NODE_1319_length_1273_cov_3080.403537_g947_i0 PRJEB48218 1319 1273 3080.403537 39213.53702601 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 430 6.49e-142   NR MCL4215391.1 2030809 g947 i0 57 0.897879025923016 381 164 89.8 0 1 1143 280 660 MCL4215391.1 DUF4209 domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 1143 430 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
26646685 26646685 PRJEB48218_S_NODE_29141_length_155_cov_4.404762_g28179_i0 PRJEB48218 29141 155 4.404762 6.8273811 FCB group 1783270 Bacteria Bacteria 52.8 3.22e-6   NR HOZ45394.1 2030809 g28179 i0 46.8 2.78709677419355 47 25 91 0 143 3 127 173 HOZ45394.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 432 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;