RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB4632" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB4632 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29970280 29970280 PRJEB4632_P_NODE_891_length_245_cov_0.895349_g853_i0 PRJEB4632 891 245 0.895349 2.19360505 Lentisphaerae bacterium GWF2_44_16 1798571 Bacteria Bacteria 48.5 1.44e-4   NR OGV49611.1 1798571 g853 i0 43.4 0.648979591836735 53 30 64.9 0 2 160 103 155 OGV49611.1 MAG: hypothetical protein A2017_16305 [Lentisphaerae bacterium GWF2_44_16] diamond 159 48.5 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium GWF2_44_16
31076256 31076256 PRJEB4632_P_NODE_935_length_243_cov_0.905882_g897_i0 PRJEB4632 935 243 0.905882 2.20129326 Lentisphaerota bacterium 1932692 Bacteria Bacteria 147 6.3e-41   NR MBN1556907.1 1932692 g897 i0 82.7 6 81 14 100 0 243 1 25 105 MBN1556907.1 sugar kinase [Lentisphaerota bacterium] diamond 1458 147 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;