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contig_metadata

17 rows where bioproject = "PRJEB4632", tax_kingdom = "Fungi" and tax_phylum = "Basidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 17 ✖

tax_kingdom 1

  • Fungi · 17 ✖

tax_clade 1

bioproject 1

  • PRJEB4632 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1335891 1335891 PRJEB4632_P_NODE_322_length_408_cov_11.167164_g284_i0 PRJEB4632 322 408 11.167164 45.56202912 Malassezia restricta 76775 Fungi Fungi 741 0   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g284 i0 99.51 106.433823529412 408 1 100 1 1 408 1507 1913 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 43425 741 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
6093187 6093187 PRJEB4632_P_NODE_325_length_405_cov_8.879518_g287_i0 PRJEB4632 325 405 8.879518 35.9620479 Phlebiopsis 82309 Fungi Fungi 749 0   NTclustered gi|391883721|gb|JQ768392.1| 82310 g287 i0 100 107.767901234568 405 0 100 0 1 405 1383 1787 Phlebiopsis gigantea isolate 11 large subunit ribosomal RNA gene, partial sequence blastn 43646 749 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Phanerochaetaceae Phlebiopsis Phlebiopsis gigantea
9918216 9918216 PRJEB4632_P_NODE_1068_length_213_cov_7.064286_g1030_i0 PRJEB4632 1068 213 7.064286 15.04692918 Fungi 4751 Fungi Fungi 394 2.7e-105   NTclustered gi|1829462362|gb|MT312780.1| 5319 g1030 i0 100 100 213 0 100 0 1 213 312 100 Irpex lacteus strain BAFC 1171 small subunit ribosomal RNA gene, partial sequence blastn 21300 394 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Irpicaceae Irpex Irpex lacteus
11193414 11193414 PRJEB4632_P_NODE_449_length_326_cov_2.015810_g411_i0 PRJEB4632 449 326 2.01581 6.5715406 Microbotryomycetes 162481 Fungi Fungi 544 4.15e-150   NTclustered gi|1358186634|gb|MH047191.1| 5278 g411 i0 96.914 98 324 10 99 0 1 324 4237 3914 Leucosporidium scottii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 31948 544 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium scottii
12815020 12815020 PRJEB4632_P_NODE_1071_length_212_cov_16.575540_g1033_i0 PRJEB4632 1071 212 16.57554 35.1401448 Phlebiopsis crassa 1647769 Fungi Fungi 392 9.67e-105   NTclustered gi|528533069|dbj|AB809163.1| 1647769 g1033 i0 100 105.051886792453 212 0 100 0 1 212 5839 5628 Porostereum crassum genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, IGS1, 5S rRNA, partial and complete sequence, strain: MAFF 420737 blastn 22271 392 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Phanerochaetaceae Phlebiopsis Phlebiopsis crassa
13743511 13743511 PRJEB4632_P_NODE_451_length_326_cov_1.438735_g413_i0 PRJEB4632 451 326 1.438735 4.6902761 Malassezia 55193 Fungi Fungi 590 5.2499999999999984e-164   NTclustered gi|1321659621|gb|KY911094.1| 76775 g413 i0 99.387 43.0122699386503 326 0 100 1 1 326 32416 32739 Malassezia restricta mitochondrion, complete genome blastn 14022 590 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17567863 17567863 PRJEB4632_P_NODE_194_length_551_cov_7.755230_g156_i0 PRJEB4632 194 551 7.75523 42.7313173 Agaricomycetes 155619 Fungi Fungi 675 0   NTclustered gi|817033502|gb|KP135272.1| 82310 g156 i0 92.421 86.5553539019964 475 32 85 3 1 471 582 108 Phlebiopsis gigantea strain FP-70857-Sp 28S ribosomal RNA gene, partial sequence blastn 47692 675 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Phanerochaetaceae Phlebiopsis Phlebiopsis gigantea
17913097 17913097 PRJEB4632_P_NODE_735_length_253_cov_4.172222_g697_i0 PRJEB4632 735 253 4.172222 10.55572166 Rhodotorula glutinis 5535 Fungi Fungi 449 6.970000000000001e-122   NTclustered gi|225134685|gb|FJ345357.1| 5535 g697 i0 98.814 75.8379446640316 253 2 100 1 1 253 3942 3691 Rhodotorula glutinis strain ATCC 16726 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 19187 449 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula glutinis
19187096 19187096 PRJEB4632_P_NODE_476_length_320_cov_6.546559_g438_i0 PRJEB4632 476 320 6.546559 20.9489888 Malassezia restricta 76775 Fungi Fungi 429 1.19e-115   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g438 i0 91.589 84.3 321 12 100 11 1 320 3304 2998 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 26976 429 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
19187099 19187099 PRJEB4632_P_NODE_556_length_300_cov_1.325991_g518_i0 PRJEB4632 556 300 1.325991 3.977973 Cystofilobasidium capitatum 5412 Fungi Fungi 370 6.78e-98   NTclustered gi|501438057|gb|FJ644524.2| 5412 g518 i0 89.655 141.66 290 30 97 0 11 300 1744 1455 Cystofilobasidium capitatum voucher 01/04 28S ribosomal RNA gene, partial sequence blastn 42498 370 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Cystofilobasidiales Cystofilobasidiaceae Cystofilobasidium Cystofilobasidium capitatum
19187100 19187100 PRJEB4632_P_NODE_616_length_280_cov_10.371981_g578_i0 PRJEB4632 616 280 10.371981 29.0415468 Phlebiopsis crassa 1647769 Fungi Fungi 496 9.92e-136   NTclustered gi|528533069|dbj|AB809163.1| 1647769 g578 i0 98.571 104.489285714286 280 4 100 0 1 280 6249 6528 Porostereum crassum genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, IGS1, 5S rRNA, partial and complete sequence, strain: MAFF 420737 blastn 29257 496 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Phanerochaetaceae Phlebiopsis Phlebiopsis crassa
20116584 20116584 PRJEB4632_P_NODE_236_length_493_cov_3.538095_g198_i0 PRJEB4632 236 493 3.538095 17.44280835 Ustilaginaceae 5268 Fungi Fungi 911 0   NTclustered gi|501438078|gb|FJ644528.2| 5270 g198 i0 100 89.9290060851927 493 0 100 0 1 493 1727 1235 Ustilago maydis voucher TUB 019110 28S ribosomal RNA gene, partial sequence blastn 44335 911 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Mycosarcoma Mycosarcoma maydis
20116590 20116590 PRJEB4632_P_NODE_496_length_314_cov_12.672199_g458_i0 PRJEB4632 496 314 12.672199 39.79070486 Agaricomycetes 155619 Fungi Fungi 580 3.0299999999999992e-161   NTclustered gi|13377979|gb|AF334933.1| 40462 g458 i0 100 100.977707006369 314 0 100 0 1 314 898 585 Pulcherricium caeruleum small subunit ribosomal RNA gene, partial sequence blastn 31707 580 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Phanerochaetaceae Terana Terana coerulea
23013543 23013543 PRJEB4632_P_NODE_799_length_250_cov_0.870056_g761_i0 PRJEB4632 799 250 0.870056 2.17514 Phlebiopsis gigantea 11 82310 Fungi Fungi 176 8e-51   NR KIP12906.1 745531 g761 i0 98.8 0.984 82 1 98.4 0 248 3 84 165 KIP12906.1 glycosyltransferase family 32 protein [Phlebiopsis gigantea 11061_1 CR5-6] diamond 246 176 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Phanerochaetaceae Phlebiopsis Phlebiopsis gigantea
23942359 23942359 PRJEB4632_P_NODE_339_length_392_cov_9.228840_g301_i0 PRJEB4632 339 392 9.22884 36.1770528 Eukaryota 2759 Fungi Fungi 725 0   NTclustered gi|8096250|dbj|AB021695.1| 5004 g301 i0 100 99.9770408163265 392 0 100 0 1 392 763 1154 Sporidiobolus ruineniae gene for 18S ribosomal RNA, partial sequence blastn 39191 725 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodosporidiobolus Rhodosporidiobolus ruineniae
24287392 24287392 PRJEB4632_P_NODE_700_length_261_cov_17.648936_g662_i0 PRJEB4632 700 261 17.648936 46.06372296 Phlebiopsis gigantea 82310 Fungi Fungi 483 7.12e-132   NTclustered gi|391883721|gb|JQ768392.1| 82310 g662 i0 100 104.51724137931 261 0 100 0 1 261 2047 1787 Phlebiopsis gigantea isolate 11 large subunit ribosomal RNA gene, partial sequence blastn 27279 483 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Phanerochaetaceae Phlebiopsis Phlebiopsis gigantea
30469419 30469419 PRJEB4632_P_NODE_953_length_243_cov_0.905882_g915_i0 PRJEB4632 953 243 0.905882 2.20129326 Polyporales 5303 Fungi Fungi 120 1.27e-29   NR KAJ3542228.1 194682 g915 i0 76.7 5.37037037037037 73 17 90.1 0 1 219 366 438 KAJ3542228.1 hypothetical protein NM688_g5996 [Phlebia brevispora] diamond 1305 121 0.991735537190083 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Meruliaceae Phlebia Phlebia brevispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;